Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
CCDC58Q4VC31 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.73□□□□□ -2.13
CCDC58Q4VC31 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
CCDC58Q4VC31 RNA5SP289-201ENST00000362332 137 ntBASIC1.73□□□□□ -2.13
CCDC58Q4VC31 AL139156.1-201ENST00000412785 841 ntBASIC1.73□□□□□ -2.13
CCDC58Q4VC31 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC58Q4VC31 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC58Q4VC31 IFNA20P-201ENST00000436840 528 ntBASIC1.73□□□□□ -2.13
CCDC58Q4VC31 FABP5P3-201ENST00000437960 408 ntBASIC1.73□□□□□ -2.13
CCDC58Q4VC31 MTCO3P11-201ENST00000455103 774 ntBASIC1.73□□□□□ -2.13
CCDC58Q4VC31 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.73□□□□□ -2.13
CCDC58Q4VC31 AC008885.2-201ENST00000509506 930 ntBASIC1.73□□□□□ -2.13
CCDC58Q4VC31 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC58Q4VC31 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC58Q4VC31 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CCDC58Q4VC31 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CCDC58Q4VC31 AC009097.3-201ENST00000563557 1018 ntBASIC1.73□□□□□ -2.13
CCDC58Q4VC31 MIR5089-201ENST00000580047 84 ntBASIC1.73□□□□□ -2.13
CCDC58Q4VC31 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.73□□□□□ -2.13
CCDC58Q4VC31 AC005034.5-201ENST00000604219 466 ntBASIC1.73□□□□□ -2.13
CCDC58Q4VC31 AC021749.1-201ENST00000604322 607 ntBASIC1.73□□□□□ -2.13
CCDC58Q4VC31 AP002826.1-201ENST00000608835 315 ntBASIC1.73□□□□□ -2.13
CCDC58Q4VC31 AC110792.4-201ENST00000609843 298 ntBASIC1.73□□□□□ -2.13
CCDC58Q4VC31 AP000254.1-201ENST00000609934 520 ntBASIC1.73□□□□□ -2.13
CCDC58Q4VC31 AC010378.1-201ENST00000619270 362 ntBASIC1.73□□□□□ -2.13
CCDC58Q4VC31 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.72□□□□□ -2.13
CCDC58Q4VC31 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
CCDC58Q4VC31 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CCDC58Q4VC31 RNU4-23P-201ENST00000362839 140 ntBASIC1.72□□□□□ -2.13
CCDC58Q4VC31 AL031679.1-201ENST00000400616 525 ntBASIC1.72□□□□□ -2.13
CCDC58Q4VC31 AL024474.1-201ENST00000404655 591 ntBASIC1.72□□□□□ -2.13
CCDC58Q4VC31 RNU4-53P-201ENST00000410828 140 ntBASIC1.72□□□□□ -2.13
CCDC58Q4VC31 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC1.72□□□□□ -2.13
CCDC58Q4VC31 CYCSP48-201ENST00000417124 323 ntBASIC1.72□□□□□ -2.13
CCDC58Q4VC31 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC58Q4VC31 AL356320.1-201ENST00000429616 163 ntBASIC1.72□□□□□ -2.13
CCDC58Q4VC31 MTCYBP45-201ENST00000435243 565 ntBASIC1.72□□□□□ -2.13
CCDC58Q4VC31 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC58Q4VC31 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.72□□□□□ -2.13
CCDC58Q4VC31 AC124916.1-201ENST00000444020 547 ntBASIC1.72□□□□□ -2.13
CCDC58Q4VC31 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC1.72□□□□□ -2.13
CCDC58Q4VC31 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.72□□□□□ -2.13
CCDC58Q4VC31 HMGN1P5-201ENST00000448591 263 ntBASIC1.72□□□□□ -2.13
CCDC58Q4VC31 EEF1B2P7-201ENST00000451177 676 ntBASIC1.72□□□□□ -2.13
CCDC58Q4VC31 AC233982.1-201ENST00000451247 436 ntBASIC1.72□□□□□ -2.13
CCDC58Q4VC31 DYNLL1P5-201ENST00000467158 270 ntBASIC1.72□□□□□ -2.13
CCDC58Q4VC31 RPL30P5-201ENST00000494923 336 ntBASIC1.72□□□□□ -2.13
CCDC58Q4VC31 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.72□□□□□ -2.13
CCDC58Q4VC31 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CCDC58Q4VC31 AC112518.2-201ENST00000508565 425 ntBASIC1.72□□□□□ -2.13
CCDC58Q4VC31 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC58Q4VC31 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC58Q4VC31 AC108043.1-201ENST00000512696 574 ntBASIC1.72□□□□□ -2.13
CCDC58Q4VC31 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC58Q4VC31 OR4V1P-201ENST00000525394 1140 ntBASIC1.72□□□□□ -2.13
CCDC58Q4VC31 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC58Q4VC31 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.72□□□□□ -2.13
CCDC58Q4VC31 AC012669.1-201ENST00000603209 283 ntBASIC1.72□□□□□ -2.13
CCDC58Q4VC31 CR589904.2-201ENST00000612533 440 ntBASIC1.72□□□□□ -2.13
CCDC58Q4VC31 MIR6873-201ENST00000622788 63 ntBASIC1.72□□□□□ -2.13
CCDC58Q4VC31 AL158801.5-201ENST00000623123 465 ntBASIC1.72□□□□□ -2.13
CCDC58Q4VC31 OR4G2P-202ENST00000641004 1759 ntBASIC1.72□□□□□ -2.13
CCDC58Q4VC31 AC008568.2-201ENST00000623862 2313 ntBASIC1.71□□□□□ -2.14
CCDC58Q4VC31 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CCDC58Q4VC31 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CCDC58Q4VC31 RNU4-42P-201ENST00000364738 142 ntBASIC1.71□□□□□ -2.14
CCDC58Q4VC31 AL356432.1-201ENST00000405809 419 ntBASIC1.71□□□□□ -2.14
CCDC58Q4VC31 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.71□□□□□ -2.14
CCDC58Q4VC31 VN1R51P-201ENST00000411675 945 ntBASIC1.71□□□□□ -2.14
CCDC58Q4VC31 AIMP1P2-201ENST00000425294 312 ntBASIC1.71□□□□□ -2.14
CCDC58Q4VC31 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.71□□□□□ -2.14
CCDC58Q4VC31 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC58Q4VC31 AC034222.1-201ENST00000494052 532 ntBASIC1.71□□□□□ -2.14
CCDC58Q4VC31 KATNBL1P4-201ENST00000503545 918 ntBASIC1.71□□□□□ -2.14
CCDC58Q4VC31 PCNAP1-201ENST00000505363 709 ntBASIC1.71□□□□□ -2.14
CCDC58Q4VC31 AC093770.1-201ENST00000511559 571 ntBASIC1.71□□□□□ -2.14
CCDC58Q4VC31 AC114781.4-201ENST00000513707 639 ntBASIC1.71□□□□□ -2.14
CCDC58Q4VC31 RNU6-928P-201ENST00000516876 104 ntBASIC1.71□□□□□ -2.14
CCDC58Q4VC31 SCARNA11.3-201ENST00000517276 130 ntBASIC1.71□□□□□ -2.14
CCDC58Q4VC31 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.71□□□□□ -2.14
CCDC58Q4VC31 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC58Q4VC31 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.71□□□□□ -2.14
CCDC58Q4VC31 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC58Q4VC31 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.71□□□□□ -2.14
CCDC58Q4VC31 AC068135.2-201ENST00000569293 1028 ntBASIC1.71□□□□□ -2.14
CCDC58Q4VC31 MIR5571-201ENST00000577998 113 ntBASIC1.71□□□□□ -2.14
CCDC58Q4VC31 AC020658.4-201ENST00000613987 684 ntBASIC1.71□□□□□ -2.14
CCDC58Q4VC31 AC073968.1-201ENST00000618594 637 ntBASIC1.71□□□□□ -2.14
CCDC58Q4VC31 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.71□□□□□ -2.14
CCDC58Q4VC31 AC244517.12-201ENST00000623581 663 ntBASIC1.71□□□□□ -2.14
CCDC58Q4VC31 AC073308.1-201ENST00000623696 305 ntBASIC1.71□□□□□ -2.14
CCDC58Q4VC31 AC024023.1-201ENST00000624530 922 ntBASIC1.71□□□□□ -2.14
CCDC58Q4VC31 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.71□□□□□ -2.14
CCDC58Q4VC31 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.71□□□□□ -2.14
CCDC58Q4VC31 MIR219B-201ENST00000637023 88 ntBASIC1.71□□□□□ -2.14
CCDC58Q4VC31 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CCDC58Q4VC31 ZNF355P-201ENST00000427301 3216 ntBASIC1.7□□□□□ -2.14
CCDC58Q4VC31 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CCDC58Q4VC31 RPL7P27-201ENST00000403775 720 ntBASIC1.7□□□□□ -2.14
CCDC58Q4VC31 AL161449.1-201ENST00000414531 1199 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms