Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC27Q2M243 RNU1-108P-201ENST00000362556 161 ntBASIC5.58□□□□□ -1.52
CCDC27Q2M243 Y_RNA.279-201ENST00000364763 95 ntBASIC5.58□□□□□ -1.52
CCDC27Q2M243 AC011933.1-201ENST00000413334 321 ntBASIC5.58□□□□□ -1.52
CCDC27Q2M243 AC009161.1-201ENST00000417306 376 ntBASIC5.58□□□□□ -1.52
CCDC27Q2M243 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC27Q2M243 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC27Q2M243 AC116533.1-201ENST00000459748 321 ntBASIC5.58□□□□□ -1.52
CCDC27Q2M243 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC27Q2M243 AC092451.1-201ENST00000480211 153 ntBASIC5.58□□□□□ -1.52
CCDC27Q2M243 MTCO2P30-201ENST00000503662 364 ntBASIC5.58□□□□□ -1.52
CCDC27Q2M243 AC010486.1-201ENST00000511793 424 ntBASIC5.58□□□□□ -1.52
CCDC27Q2M243 RNU6-507P-201ENST00000516045 100 ntBASIC5.58□□□□□ -1.52
CCDC27Q2M243 RNU6-1073P-201ENST00000517182 106 ntBASIC5.58□□□□□ -1.52
CCDC27Q2M243 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC27Q2M243 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC27Q2M243 BNIP3P6-201ENST00000549284 499 ntBASIC5.58□□□□□ -1.52
CCDC27Q2M243 AC005951.2-201ENST00000576282 495 ntBASIC5.58□□□□□ -1.52
CCDC27Q2M243 AC114781.5-201ENST00000615297 108 ntBASIC5.58□□□□□ -1.52
CCDC27Q2M243 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC27Q2M243 AC100810.6-201ENST00000638068 285 ntBASIC5.58□□□□□ -1.52
CCDC27Q2M243 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC27Q2M243 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC27Q2M243 PRO1804-201ENST00000623780 2050 ntBASIC5.58□□□□□ -1.52
CCDC27Q2M243 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC27Q2M243 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC27Q2M243 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CCDC27Q2M243 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC27Q2M243 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC27Q2M243 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC27Q2M243 AC103710.2-202ENST00000641454 2853 ntBASIC5.57□□□□□ -1.52
CCDC27Q2M243 RPL32P3-201ENST00000359025 275 ntBASIC5.57□□□□□ -1.52
CCDC27Q2M243 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC27Q2M243 RNU6-1009P-201ENST00000390996 107 ntBASIC5.57□□□□□ -1.52
CCDC27Q2M243 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC27Q2M243 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC27Q2M243 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC27Q2M243 AL118520.1-201ENST00000450770 291 ntBASIC5.57□□□□□ -1.52
CCDC27Q2M243 MTND3P16-201ENST00000452205 344 ntBASIC5.57□□□□□ -1.52
CCDC27Q2M243 RNA5SP246-201ENST00000458909 119 ntBASIC5.57□□□□□ -1.52
CCDC27Q2M243 RPL23AP11-201ENST00000475260 469 ntBASIC5.57□□□□□ -1.52
CCDC27Q2M243 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC27Q2M243 AC108043.1-201ENST00000512696 574 ntBASIC5.57□□□□□ -1.52
CCDC27Q2M243 RNA5SP519-201ENST00000516480 119 ntBASIC5.57□□□□□ -1.52
CCDC27Q2M243 RNU6-677P-201ENST00000516914 101 ntBASIC5.57□□□□□ -1.52
CCDC27Q2M243 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC27Q2M243 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC27Q2M243 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC27Q2M243 MTND6P33-201ENST00000571794 183 ntBASIC5.57□□□□□ -1.52
CCDC27Q2M243 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC27Q2M243 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC27Q2M243 MIR3138-201ENST00000585238 82 ntBASIC5.57□□□□□ -1.52
CCDC27Q2M243 AC067852.3-201ENST00000589177 561 ntBASIC5.57□□□□□ -1.52
CCDC27Q2M243 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC27Q2M243 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC27Q2M243 AC007619.2-201ENST00000605743 379 ntBASIC5.57□□□□□ -1.52
CCDC27Q2M243 AL365204.3-201ENST00000612448 685 ntBASIC5.57□□□□□ -1.52
CCDC27Q2M243 MIR3653-201ENST00000625572 110 ntBASIC5.57□□□□□ -1.52
CCDC27Q2M243 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CCDC27Q2M243 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC27Q2M243 AC092435.4-201ENST00000623012 4159 ntBASIC5.57□□□□□ -1.52
CCDC27Q2M243 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC27Q2M243 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC27Q2M243 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC27Q2M243 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CCDC27Q2M243 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC27Q2M243 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC27Q2M243 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
CCDC27Q2M243 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CCDC27Q2M243 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC27Q2M243 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC27Q2M243 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC27Q2M243 NEAT1-202ENST00000501122 22743 ntBASIC5.56□□□□□ -1.52
CCDC27Q2M243 Y_RNA.231-201ENST00000364358 102 ntBASIC5.56□□□□□ -1.52
CCDC27Q2M243 RNU6-190P-201ENST00000384154 102 ntBASIC5.56□□□□□ -1.52
CCDC27Q2M243 RNA5SP36-201ENST00000410197 133 ntBASIC5.56□□□□□ -1.52
CCDC27Q2M243 RNU4-46P-201ENST00000410818 138 ntBASIC5.56□□□□□ -1.52
CCDC27Q2M243 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC27Q2M243 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC27Q2M243 SRIP2-201ENST00000428470 166 ntBASIC5.56□□□□□ -1.52
CCDC27Q2M243 HMGB1P27-201ENST00000431429 603 ntBASIC5.56□□□□□ -1.52
CCDC27Q2M243 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC27Q2M243 RNU6-953P-201ENST00000459154 107 ntBASIC5.56□□□□□ -1.52
CCDC27Q2M243 AP000873.1-201ENST00000463987 400 ntBASIC5.56□□□□□ -1.52
CCDC27Q2M243 HMGN1P12-201ENST00000499125 195 ntBASIC5.56□□□□□ -1.52
CCDC27Q2M243 AC091951.2-201ENST00000500762 203 ntBASIC5.56□□□□□ -1.52
CCDC27Q2M243 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
CCDC27Q2M243 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC27Q2M243 RNU6-875P-201ENST00000516488 106 ntBASIC5.56□□□□□ -1.52
CCDC27Q2M243 ADI1P3-201ENST00000549509 470 ntBASIC5.56□□□□□ -1.52
CCDC27Q2M243 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC27Q2M243 DPPA3P3-201ENST00000603842 430 ntBASIC5.56□□□□□ -1.52
CCDC27Q2M243 MIR432-201ENST00000606207 94 ntBASIC5.56□□□□□ -1.52
CCDC27Q2M243 AC009994.1-201ENST00000606889 253 ntBASIC5.56□□□□□ -1.52
CCDC27Q2M243 AC012409.4-201ENST00000612923 249 ntBASIC5.56□□□□□ -1.52
CCDC27Q2M243 AL355810.1-201ENST00000614629 552 ntBASIC5.56□□□□□ -1.52
CCDC27Q2M243 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC27Q2M243 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC27Q2M243 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CCDC27Q2M243 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms