Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.99□□□□□ -1.61
RSPO4Q2I0M5 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.99□□□□□ -1.61
RSPO4Q2I0M5 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.99□□□□□ -1.61
RSPO4Q2I0M5 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 AC100821.1-201ENST00000523153 2479 ntBASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 RNA5SP28-201ENST00000363841 119 ntBASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 RNU6-1130P-201ENST00000365434 107 ntBASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 RNU6-1329P-201ENST00000365664 107 ntBASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 MIR670-201ENST00000390142 98 ntBASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 RPS4XP7-201ENST00000406274 780 ntBASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 RNU2-52P-201ENST00000410680 190 ntBASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 GPS2P1-201ENST00000411761 986 ntBASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 HSPD1P21-201ENST00000436541 245 ntBASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 CBX1P4-201ENST00000439415 457 ntBASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 EEF1A1P1-201ENST00000447052 739 ntBASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 AL139099.1-201ENST00000497398 403 ntBASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 MRPS33P2-201ENST00000507850 322 ntBASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 AC074250.1-201ENST00000511117 192 ntBASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 RNA5SP116-201ENST00000516132 98 ntBASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 RNU6-64P-201ENST00000517119 105 ntBASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 AL133153.1-201ENST00000557756 303 ntBASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 AC233702.2-202ENST00000562547 291 ntBASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 RN7SL356P-201ENST00000582228 248 ntBASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 AC000123.2-201ENST00000623124 461 ntBASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 AC107021.2-201ENST00000567714 2095 ntBASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RSPO4Q2I0M5 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 RNU6-525P-201ENST00000363685 104 ntBASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 Y_RNA.272-201ENST00000364696 102 ntBASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 RNA5SP90-201ENST00000364801 99 ntBASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 RNU6-790P-201ENST00000384479 105 ntBASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 RNA5SP44-201ENST00000410446 133 ntBASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 Y_RNA.602-201ENST00000410535 92 ntBASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 MTND3P9-201ENST00000429526 346 ntBASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 RNU7-138P-201ENST00000459479 64 ntBASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 AC098583.1-201ENST00000480875 255 ntBASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 NIP7P2-201ENST00000485801 544 ntBASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 ACA59.1-201ENST00000515966 143 ntBASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 SCARNA13-201ENST00000516672 275 ntBASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 AC008962.1-201ENST00000605729 304 ntBASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 AL591516.1-201ENST00000611326 274 ntBASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 ZYXP1-201ENST00000617638 118 ntBASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 AC000095.2-202ENST00000637415 154 ntBASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 AC009951.1-201ENST00000623674 2614 ntBASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 AC009229.4-201ENST00000623854 1947 ntBASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RSPO4Q2I0M5 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.96□□□□□ -1.61
RSPO4Q2I0M5 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
RSPO4Q2I0M5 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.96□□□□□ -1.61
RSPO4Q2I0M5 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
RSPO4Q2I0M5 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
RSPO4Q2I0M5 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.62
RSPO4Q2I0M5 XIAPP3-201ENST00000312918 795 ntBASIC4.96□□□□□ -1.62
RSPO4Q2I0M5 Y_RNA.143-201ENST00000363520 106 ntBASIC4.96□□□□□ -1.62
RSPO4Q2I0M5 MIR129-1-201ENST00000384972 72 ntBASIC4.96□□□□□ -1.62
RSPO4Q2I0M5 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
RSPO4Q2I0M5 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RSPO4Q2I0M5 MTCYBP2-201ENST00000407745 171 ntBASIC4.96□□□□□ -1.62
RSPO4Q2I0M5 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.96□□□□□ -1.62
RSPO4Q2I0M5 AL358176.3-201ENST00000420757 454 ntBASIC4.96□□□□□ -1.62
RSPO4Q2I0M5 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms