Protein–RNA interactions for Protein: Q1ED39

KNOP1, Lysine-rich nucleolar protein 1, humanhuman

Known RBP Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1Q1ED39 AL353997.4-201ENST00000586196 166 ntBASIC3.13□□□□□ -1.91
KNOP1Q1ED39 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.13□□□□□ -1.91
KNOP1Q1ED39 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.13□□□□□ -1.91
KNOP1Q1ED39 BBIP1P1-201ENST00000602999 279 ntBASIC3.13□□□□□ -1.91
KNOP1Q1ED39 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.13□□□□□ -1.91
KNOP1Q1ED39 AC010738.1-201ENST00000604970 987 ntBASIC3.13□□□□□ -1.91
KNOP1Q1ED39 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.13□□□□□ -1.91
KNOP1Q1ED39 AC128687.1-201ENST00000605304 619 ntBASIC3.13□□□□□ -1.91
KNOP1Q1ED39 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KNOP1Q1ED39 AC090186.1-201ENST00000605991 572 ntBASIC3.13□□□□□ -1.91
KNOP1Q1ED39 AC018755.4-201ENST00000619715 454 ntBASIC3.13□□□□□ -1.91
KNOP1Q1ED39 AC078883.4-201ENST00000623218 367 ntBASIC3.13□□□□□ -1.91
KNOP1Q1ED39 AL356596.1-201ENST00000624230 379 ntBASIC3.13□□□□□ -1.91
KNOP1Q1ED39 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.13□□□□□ -1.91
KNOP1Q1ED39 PCMTD1P7-201ENST00000634506 357 ntBASIC3.13□□□□□ -1.91
KNOP1Q1ED39 AC099063.3-201ENST00000642066 185 ntBASIC3.13□□□□□ -1.91
KNOP1Q1ED39 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.13□□□□□ -1.91
KNOP1Q1ED39 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.13□□□□□ -1.91
KNOP1Q1ED39 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.13□□□□□ -1.91
KNOP1Q1ED39 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KNOP1Q1ED39 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KNOP1Q1ED39 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.13□□□□□ -1.91
KNOP1Q1ED39 AL049780.3-201ENST00000624612 1583 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 AC007256.1-201ENST00000392253 2765 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 AC092593.1-201ENST00000515413 1815 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.12□□□□□ -1.91
KNOP1Q1ED39 RNU6-500P-201ENST00000362349 107 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 RNU6-553P-201ENST00000364047 96 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 RNU6-289P-201ENST00000364093 107 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 RNA5SP387-201ENST00000364226 106 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.12□□□□□ -1.91
KNOP1Q1ED39 MIR181A2-201ENST00000384863 110 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
KNOP1Q1ED39 AC092447.6-201ENST00000414578 210 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 EEF1A1P41-201ENST00000414667 207 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 NDUFB4P5-201ENST00000415445 361 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.12□□□□□ -1.91
KNOP1Q1ED39 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.12□□□□□ -1.91
KNOP1Q1ED39 TRIAP1P1-201ENST00000427062 225 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 AL139132.1-201ENST00000431587 344 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 AL445567.1-201ENST00000439121 144 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 AC112653.1-201ENST00000443851 386 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 AC140076.1-201ENST00000449897 361 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 AL353691.1-201ENST00000451332 387 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 snoU13.22-201ENST00000459428 104 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.12□□□□□ -1.91
KNOP1Q1ED39 RPL30P6-201ENST00000475925 342 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 AC072039.1-201ENST00000477611 581 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.12□□□□□ -1.91
KNOP1Q1ED39 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.12□□□□□ -1.91
KNOP1Q1ED39 AC005178.1-201ENST00000508392 440 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.12□□□□□ -1.91
KNOP1Q1ED39 AC093677.1-201ENST00000514414 678 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 RPL12P22-201ENST00000519073 490 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
KNOP1Q1ED39 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.12□□□□□ -1.91
KNOP1Q1ED39 AC022080.3-201ENST00000544433 482 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 SETP7-201ENST00000552169 453 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 AC007954.1-201ENST00000554198 494 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.12□□□□□ -1.91
KNOP1Q1ED39 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.12□□□□□ -1.91
KNOP1Q1ED39 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 MIR4474-201ENST00000579189 78 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.12□□□□□ -1.91
KNOP1Q1ED39 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.12□□□□□ -1.91
KNOP1Q1ED39 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.12□□□□□ -1.91
KNOP1Q1ED39 AC055876.5-201ENST00000605667 259 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 AL390240.1-201ENST00000612950 384 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 AC068057.2-201ENST00000624047 895 ntBASIC3.12□□□□□ -1.91
KNOP1Q1ED39 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.12□□□□□ -1.91
KNOP1Q1ED39 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
KNOP1Q1ED39 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.11□□□□□ -1.91
KNOP1Q1ED39 AC110774.1-201ENST00000623567 2018 ntBASIC3.11□□□□□ -1.91
KNOP1Q1ED39 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.11□□□□□ -1.91
KNOP1Q1ED39 RNU6-50P-201ENST00000362356 103 ntBASIC3.11□□□□□ -1.91
KNOP1Q1ED39 RN7SKP266-201ENST00000410232 287 ntBASIC3.11□□□□□ -1.91
KNOP1Q1ED39 RPS15AP38-201ENST00000413110 372 ntBASIC3.11□□□□□ -1.91
KNOP1Q1ED39 BMS1P22-201ENST00000414726 313 ntBASIC3.11□□□□□ -1.91
KNOP1Q1ED39 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.11□□□□□ -1.91
KNOP1Q1ED39 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.11□□□□□ -1.91
KNOP1Q1ED39 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.11□□□□□ -1.91
KNOP1Q1ED39 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.11□□□□□ -1.91
KNOP1Q1ED39 RPS20P5-201ENST00000434808 360 ntBASIC3.11□□□□□ -1.91
KNOP1Q1ED39 AC093156.1-201ENST00000440382 670 ntBASIC3.11□□□□□ -1.91
KNOP1Q1ED39 RPS3AP12-201ENST00000443616 753 ntBASIC3.11□□□□□ -1.91
KNOP1Q1ED39 snoU13.4-201ENST00000458916 104 ntBASIC3.11□□□□□ -1.91
KNOP1Q1ED39 AC104563.1-201ENST00000476147 376 ntBASIC3.11□□□□□ -1.91
KNOP1Q1ED39 HMGB1P36-201ENST00000487709 576 ntBASIC3.11□□□□□ -1.91
KNOP1Q1ED39 RPF2P2-201ENST00000504693 896 ntBASIC3.11□□□□□ -1.91
KNOP1Q1ED39 AC111000.2-201ENST00000507775 550 ntBASIC3.11□□□□□ -1.91
KNOP1Q1ED39 AC004062.1-201ENST00000509926 645 ntBASIC3.11□□□□□ -1.91
KNOP1Q1ED39 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.11□□□□□ -1.91
KNOP1Q1ED39 RNU1-61P-201ENST00000516107 151 ntBASIC3.11□□□□□ -1.91
KNOP1Q1ED39 RNU6-759P-201ENST00000516740 103 ntBASIC3.11□□□□□ -1.91
KNOP1Q1ED39 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.11□□□□□ -1.91
KNOP1Q1ED39 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.11□□□□□ -1.91
KNOP1Q1ED39 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.11□□□□□ -1.91
KNOP1Q1ED39 HPRT1P3-201ENST00000539521 576 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms