Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.84□□□□□ -1.63
ERVFC1P60507 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ERVFC1P60507 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ERVFC1P60507 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.84□□□□□ -1.63
ERVFC1P60507 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.84□□□□□ -1.63
ERVFC1P60507 AC024619.4-201ENST00000580924 316 ntBASIC4.84□□□□□ -1.63
ERVFC1P60507 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.84□□□□□ -1.63
ERVFC1P60507 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.84□□□□□ -1.63
ERVFC1P60507 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.84□□□□□ -1.63
ERVFC1P60507 AC092747.3-201ENST00000603769 301 ntBASIC4.84□□□□□ -1.63
ERVFC1P60507 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.84□□□□□ -1.63
ERVFC1P60507 AC006157.1-201ENST00000611750 366 ntBASIC4.84□□□□□ -1.63
ERVFC1P60507 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.84□□□□□ -1.63
ERVFC1P60507 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.84□□□□□ -1.63
ERVFC1P60507 MUC2-202ENST00000613187 4845 ntBASIC4.84□□□□□ -1.63
ERVFC1P60507 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
ERVFC1P60507 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ERVFC1P60507 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
ERVFC1P60507 BDP1P-201ENST00000582658 1990 ntBASIC4.84□□□□□ -1.64
ERVFC1P60507 AL731532.2-201ENST00000623542 1953 ntBASIC4.84□□□□□ -1.64
ERVFC1P60507 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
ERVFC1P60507 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.84□□□□□ -1.64
ERVFC1P60507 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ERVFC1P60507 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.83□□□□□ -1.64
ERVFC1P60507 AL391684.1-202ENST00000641293 1636 ntBASIC4.83□□□□□ -1.64
ERVFC1P60507 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ERVFC1P60507 RNU6-278P-201ENST00000390945 109 ntBASIC4.83□□□□□ -1.64
ERVFC1P60507 SDHCP2-201ENST00000398565 501 ntBASIC4.83□□□□□ -1.64
ERVFC1P60507 RNU4-46P-201ENST00000410818 138 ntBASIC4.83□□□□□ -1.64
ERVFC1P60507 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.83□□□□□ -1.64
ERVFC1P60507 E2F6P2-201ENST00000420708 748 ntBASIC4.83□□□□□ -1.64
ERVFC1P60507 AL669831.1-202ENST00000428504 417 ntBASIC4.83□□□□□ -1.64
ERVFC1P60507 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.83□□□□□ -1.64
ERVFC1P60507 RPL12P46-201ENST00000436610 195 ntBASIC4.83□□□□□ -1.64
ERVFC1P60507 RPL7P28-201ENST00000437739 740 ntBASIC4.83□□□□□ -1.64
ERVFC1P60507 AC105402.2-201ENST00000438503 358 ntBASIC4.83□□□□□ -1.64
ERVFC1P60507 RPL23AP89-201ENST00000439324 255 ntBASIC4.83□□□□□ -1.64
ERVFC1P60507 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ERVFC1P60507 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.83□□□□□ -1.64
ERVFC1P60507 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.83□□□□□ -1.64
ERVFC1P60507 RNU7-59P-201ENST00000459101 61 ntBASIC4.83□□□□□ -1.64
ERVFC1P60507 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.83□□□□□ -1.64
ERVFC1P60507 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.83□□□□□ -1.64
ERVFC1P60507 RNU6-1016P-201ENST00000516689 94 ntBASIC4.83□□□□□ -1.64
ERVFC1P60507 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ERVFC1P60507 GNAI2P1-201ENST00000541815 315 ntBASIC4.83□□□□□ -1.64
ERVFC1P60507 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.83□□□□□ -1.64
ERVFC1P60507 BNIP3P16-201ENST00000589779 534 ntBASIC4.83□□□□□ -1.64
ERVFC1P60507 PSMA6P4-201ENST00000603247 718 ntBASIC4.83□□□□□ -1.64
ERVFC1P60507 AL591034.3-201ENST00000605511 685 ntBASIC4.83□□□□□ -1.64
ERVFC1P60507 AC020634.1-201ENST00000608701 549 ntBASIC4.83□□□□□ -1.64
ERVFC1P60507 AC062037.2-201ENST00000610137 73 ntBASIC4.83□□□□□ -1.64
ERVFC1P60507 FAM157A-202ENST00000615155 405 ntBASIC4.83□□□□□ -1.64
ERVFC1P60507 AC010378.1-201ENST00000619270 362 ntBASIC4.83□□□□□ -1.64
ERVFC1P60507 AC008785.1-201ENST00000624475 456 ntBASIC4.83□□□□□ -1.64
ERVFC1P60507 AC055839.1-201ENST00000634467 498 ntBASIC4.83□□□□□ -1.64
ERVFC1P60507 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.83□□□□□ -1.64
ERVFC1P60507 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ERVFC1P60507 ASNSP1-201ENST00000518311 1939 ntBASIC4.83□□□□□ -1.64
ERVFC1P60507 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.83□□□□□ -1.64
ERVFC1P60507 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.83□□□□□ -1.64
ERVFC1P60507 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
ERVFC1P60507 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.82□□□□□ -1.64
ERVFC1P60507 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
ERVFC1P60507 DDX18P3-201ENST00000404856 2007 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 NEAT1-202ENST00000501122 22743 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
ERVFC1P60507 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
ERVFC1P60507 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ERVFC1P60507 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ERVFC1P60507 RN7SKP280-201ENST00000364196 304 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 RNU1-132P-201ENST00000364300 164 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 Y_RNA.489-201ENST00000384410 101 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 RNU1-13P-201ENST00000384499 162 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ERVFC1P60507 RNU6-1109P-201ENST00000391187 107 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 Y_RNA.645-201ENST00000391229 102 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 SNORA75.6-201ENST00000391318 127 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 RNA5SP317-201ENST00000410176 116 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 RNA5SP311-201ENST00000411290 116 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 EIF4A1P3-201ENST00000411521 244 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 AC080125.1-201ENST00000414888 684 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 COX6CP15-201ENST00000426313 211 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 SNORA84-201ENST00000459229 133 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 PLGLA-201ENST00000465668 449 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 RPL21P93-201ENST00000480465 489 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 AC104564.1-201ENST00000493028 407 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 AL139099.1-201ENST00000497398 403 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 AC020593.1-201ENST00000507399 299 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 PARP4P3-201ENST00000510265 317 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 RNU6-189P-201ENST00000516120 101 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 RNA5SP315-201ENST00000516340 116 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 RNU6-347P-201ENST00000516658 105 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 RNA5SP312-201ENST00000517068 116 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.82□□□□□ -1.64
ERVFC1P60507 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.82□□□□□ -1.64
ERVFC1P60507 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.82□□□□□ -1.64
ERVFC1P60507 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.82□□□□□ -1.64
ERVFC1P60507 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.82□□□□□ -1.64
ERVFC1P60507 AC104695.3-201ENST00000604052 296 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 159 ms