Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC096725.1-201ENST00000514266 313 ntBASIC2.74□□□□□ -1.97
CDH4P55283 RNU6-528P-201ENST00000516926 100 ntBASIC2.74□□□□□ -1.97
CDH4P55283 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.74□□□□□ -1.97
CDH4P55283 AL133271.1-201ENST00000538229 291 ntBASIC2.74□□□□□ -1.97
CDH4P55283 AC020895.1-201ENST00000595362 272 ntBASIC2.74□□□□□ -1.97
CDH4P55283 AC008739.2-201ENST00000597006 317 ntBASIC2.74□□□□□ -1.97
CDH4P55283 AC011451.2-201ENST00000604303 598 ntBASIC2.74□□□□□ -1.97
CDH4P55283 AC023158.2-201ENST00000614876 543 ntBASIC2.74□□□□□ -1.97
CDH4P55283 AC090132.2-201ENST00000615881 347 ntBASIC2.74□□□□□ -1.97
CDH4P55283 AC007998.5-201ENST00000622938 237 ntBASIC2.74□□□□□ -1.97
CDH4P55283 CR381653.2-201ENST00000624041 768 ntBASIC2.74□□□□□ -1.97
CDH4P55283 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.74□□□□□ -1.97
CDH4P55283 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.74□□□□□ -1.97
CDH4P55283 AC099654.7-201ENST00000635788 2127 ntBASIC2.74□□□□□ -1.97
CDH4P55283 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.73□□□□□ -1.97
CDH4P55283 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.73□□□□□ -1.97
CDH4P55283 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CDH4P55283 VTRNA1-1-201ENST00000363120 99 ntBASIC2.73□□□□□ -1.97
CDH4P55283 Y_RNA.408-201ENST00000383987 102 ntBASIC2.73□□□□□ -1.97
CDH4P55283 AL356057.3-201ENST00000402607 340 ntBASIC2.73□□□□□ -1.97
CDH4P55283 SNORD88.1-201ENST00000408684 91 ntBASIC2.73□□□□□ -1.97
CDH4P55283 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH4P55283 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.73□□□□□ -1.97
CDH4P55283 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.73□□□□□ -1.97
CDH4P55283 AL512844.2-201ENST00000433990 593 ntBASIC2.73□□□□□ -1.97
CDH4P55283 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.73□□□□□ -1.97
CDH4P55283 TAAR7P-201ENST00000436141 242 ntBASIC2.73□□□□□ -1.97
CDH4P55283 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CDH4P55283 MTND4P6-201ENST00000438297 472 ntBASIC2.73□□□□□ -1.97
CDH4P55283 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH4P55283 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.73□□□□□ -1.97
CDH4P55283 AC108938.1-201ENST00000451204 136 ntBASIC2.73□□□□□ -1.97
CDH4P55283 AL109933.2-201ENST00000452651 260 ntBASIC2.73□□□□□ -1.97
CDH4P55283 MTND2P24-201ENST00000453434 806 ntBASIC2.73□□□□□ -1.97
CDH4P55283 AC092798.1-201ENST00000458542 409 ntBASIC2.73□□□□□ -1.97
CDH4P55283 RNU6-420P-201ENST00000458780 107 ntBASIC2.73□□□□□ -1.97
CDH4P55283 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH4P55283 XKRY-201ENST00000510392 1100 ntBASIC2.73□□□□□ -1.97
CDH4P55283 TTC39CP1-201ENST00000512513 755 ntBASIC2.73□□□□□ -1.97
CDH4P55283 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.73□□□□□ -1.97
CDH4P55283 SNORA31.22-201ENST00000517204 135 ntBASIC2.73□□□□□ -1.97
CDH4P55283 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.73□□□□□ -1.97
CDH4P55283 AC087373.1-201ENST00000524920 491 ntBASIC2.73□□□□□ -1.97
CDH4P55283 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH4P55283 HMGB1P14-201ENST00000557424 591 ntBASIC2.73□□□□□ -1.97
CDH4P55283 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.73□□□□□ -1.97
CDH4P55283 AC090888.1-201ENST00000561335 1141 ntBASIC2.73□□□□□ -1.97
CDH4P55283 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH4P55283 AL022067.1-201ENST00000602426 454 ntBASIC2.73□□□□□ -1.97
CDH4P55283 AC013553.2-201ENST00000604244 589 ntBASIC2.73□□□□□ -1.97
CDH4P55283 AC107871.2-201ENST00000612894 502 ntBASIC2.73□□□□□ -1.97
CDH4P55283 AC002064.3-201ENST00000623448 346 ntBASIC2.73□□□□□ -1.97
CDH4P55283 AC073308.1-201ENST00000623696 305 ntBASIC2.73□□□□□ -1.97
CDH4P55283 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CDH4P55283 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.73□□□□□ -1.97
CDH4P55283 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CDH4P55283 Z82195.2-201ENST00000612348 18351 ntBASIC2.72□□□□□ -1.97
CDH4P55283 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CDH4P55283 ASNSP3-201ENST00000451989 1306 ntBASIC2.72□□□□□ -1.97
CDH4P55283 OR4G2P-202ENST00000641004 1759 ntBASIC2.72□□□□□ -1.97
CDH4P55283 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CDH4P55283 MIR34A-201ENST00000385130 110 ntBASIC2.72□□□□□ -1.97
CDH4P55283 HMGB1P17-201ENST00000403495 628 ntBASIC2.72□□□□□ -1.97
CDH4P55283 AC068533.2-201ENST00000411872 306 ntBASIC2.72□□□□□ -1.97
CDH4P55283 BX682237.1-201ENST00000415016 335 ntBASIC2.72□□□□□ -1.97
CDH4P55283 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.72□□□□□ -1.97
CDH4P55283 Z75741.2-201ENST00000417272 1167 ntBASIC2.72□□□□□ -1.97
CDH4P55283 RPL7P37-201ENST00000425095 738 ntBASIC2.72□□□□□ -1.97
CDH4P55283 ARL5AP4-201ENST00000430731 512 ntBASIC2.72□□□□□ -1.97
CDH4P55283 GTF2IP3-201ENST00000433887 494 ntBASIC2.72□□□□□ -1.97
CDH4P55283 snoU13.8-201ENST00000458890 104 ntBASIC2.72□□□□□ -1.97
CDH4P55283 RPL23AP11-201ENST00000475260 469 ntBASIC2.72□□□□□ -1.97
CDH4P55283 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CDH4P55283 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CDH4P55283 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.72□□□□□ -1.97
CDH4P55283 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.72□□□□□ -1.97
CDH4P55283 AC090136.1-201ENST00000520009 240 ntBASIC2.72□□□□□ -1.97
CDH4P55283 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CDH4P55283 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.72□□□□□ -1.97
CDH4P55283 AL355836.1-201ENST00000555951 870 ntBASIC2.72□□□□□ -1.97
CDH4P55283 MIR3162-201ENST00000581818 82 ntBASIC2.72□□□□□ -1.97
CDH4P55283 MIR4635-201ENST00000583759 79 ntBASIC2.72□□□□□ -1.97
CDH4P55283 RPL23AP78-201ENST00000599928 470 ntBASIC2.72□□□□□ -1.97
CDH4P55283 AL158211.4-201ENST00000606988 584 ntBASIC2.72□□□□□ -1.97
CDH4P55283 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CDH4P55283 AL158163.2-201ENST00000619110 700 ntBASIC2.72□□□□□ -1.97
CDH4P55283 AP002371.2-201ENST00000624450 503 ntBASIC2.72□□□□□ -1.97
CDH4P55283 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.72□□□□□ -1.97
CDH4P55283 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.72□□□□□ -1.97
CDH4P55283 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.72□□□□□ -1.97
CDH4P55283 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
CDH4P55283 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CDH4P55283 AL022578.1-201ENST00000439330 1433 ntBASIC2.71□□□□□ -1.98
CDH4P55283 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CDH4P55283 RNU6-270P-201ENST00000364131 105 ntBASIC2.71□□□□□ -1.98
CDH4P55283 RNU6-1257P-201ENST00000384625 110 ntBASIC2.71□□□□□ -1.98
CDH4P55283 MIR514A1-201ENST00000385133 98 ntBASIC2.71□□□□□ -1.98
CDH4P55283 SNORA40.2-201ENST00000390847 128 ntBASIC2.71□□□□□ -1.98
CDH4P55283 FO393413.1-201ENST00000402892 195 ntBASIC2.71□□□□□ -1.98
CDH4P55283 AL139095.1-201ENST00000404326 391 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms