Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC073325.2-201ENST00000339545 159 ntBASIC3.16□□□□□ -1.9
VCPP55072 MIR22-201ENST00000362190 85 ntBASIC3.16□□□□□ -1.9
VCPP55072 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.16□□□□□ -1.9
VCPP55072 MIR493-201ENST00000385254 89 ntBASIC3.16□□□□□ -1.9
VCPP55072 RNU2-15P-201ENST00000410692 191 ntBASIC3.16□□□□□ -1.9
VCPP55072 ATG3P1-201ENST00000419507 911 ntBASIC3.16□□□□□ -1.9
VCPP55072 PSMA6P3-201ENST00000428242 164 ntBASIC3.16□□□□□ -1.9
VCPP55072 SRIP2-201ENST00000428470 166 ntBASIC3.16□□□□□ -1.9
VCPP55072 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.16□□□□□ -1.9
VCPP55072 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.16□□□□□ -1.9
VCPP55072 AL590664.1-201ENST00000448065 339 ntBASIC3.16□□□□□ -1.9
VCPP55072 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.16□□□□□ -1.9
VCPP55072 AL031183.1-201ENST00000457667 207 ntBASIC3.16□□□□□ -1.9
VCPP55072 snoU109.4-201ENST00000458953 143 ntBASIC3.16□□□□□ -1.9
VCPP55072 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VCPP55072 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.16□□□□□ -1.9
VCPP55072 AC108729.1-201ENST00000487812 947 ntBASIC3.16□□□□□ -1.9
VCPP55072 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.16□□□□□ -1.9
VCPP55072 TMEM251P1-201ENST00000503717 318 ntBASIC3.16□□□□□ -1.9
VCPP55072 AC114981.1-201ENST00000503897 678 ntBASIC3.16□□□□□ -1.9
VCPP55072 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
VCPP55072 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.16□□□□□ -1.9
VCPP55072 AC006390.1-201ENST00000508068 283 ntBASIC3.16□□□□□ -1.9
VCPP55072 AC008413.1-201ENST00000511864 177 ntBASIC3.16□□□□□ -1.9
VCPP55072 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.16□□□□□ -1.9
VCPP55072 EEF1A1P37-201ENST00000522748 715 ntBASIC3.16□□□□□ -1.9
VCPP55072 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.16□□□□□ -1.9
VCPP55072 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.16□□□□□ -1.9
VCPP55072 DNAJC8P1-201ENST00000554535 372 ntBASIC3.16□□□□□ -1.9
VCPP55072 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
VCPP55072 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.16□□□□□ -1.9
VCPP55072 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.16□□□□□ -1.9
VCPP55072 AC055876.1-202ENST00000567053 138 ntBASIC3.16□□□□□ -1.9
VCPP55072 AC138761.3-201ENST00000579993 334 ntBASIC3.16□□□□□ -1.9
VCPP55072 AC026790.2-201ENST00000606282 430 ntBASIC3.16□□□□□ -1.9
VCPP55072 AC080013.3-201ENST00000606839 578 ntBASIC3.16□□□□□ -1.9
VCPP55072 AC007349.4-201ENST00000608114 532 ntBASIC3.16□□□□□ -1.9
VCPP55072 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.16□□□□□ -1.9
VCPP55072 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.16□□□□□ -1.9
VCPP55072 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.16□□□□□ -1.9
VCPP55072 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VCPP55072 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VCPP55072 AL390862.1-201ENST00000635467 1469 ntBASIC3.16□□□□□ -1.9
VCPP55072 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
VCPP55072 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
VCPP55072 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VCPP55072 SNORA18.3-201ENST00000384122 132 ntBASIC3.15□□□□□ -1.91
VCPP55072 RPL7P25-201ENST00000404151 721 ntBASIC3.15□□□□□ -1.91
VCPP55072 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.15□□□□□ -1.91
VCPP55072 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.15□□□□□ -1.91
VCPP55072 MTCO2P20-201ENST00000437339 673 ntBASIC3.15□□□□□ -1.91
VCPP55072 MTND4P6-201ENST00000438297 472 ntBASIC3.15□□□□□ -1.91
VCPP55072 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.15□□□□□ -1.91
VCPP55072 RN7SL633P-201ENST00000488974 297 ntBASIC3.15□□□□□ -1.91
VCPP55072 AC090453.1-201ENST00000495560 436 ntBASIC3.15□□□□□ -1.91
VCPP55072 HIGD1AP13-201ENST00000509878 289 ntBASIC3.15□□□□□ -1.91
VCPP55072 XKRY-201ENST00000510392 1100 ntBASIC3.15□□□□□ -1.91
VCPP55072 RNU6-1095P-201ENST00000516148 108 ntBASIC3.15□□□□□ -1.91
VCPP55072 HSPA8P13-201ENST00000523715 472 ntBASIC3.15□□□□□ -1.91
VCPP55072 MTCO2P15-201ENST00000532655 656 ntBASIC3.15□□□□□ -1.91
VCPP55072 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
VCPP55072 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.15□□□□□ -1.91
VCPP55072 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.15□□□□□ -1.91
VCPP55072 AC009097.3-201ENST00000563557 1018 ntBASIC3.15□□□□□ -1.91
VCPP55072 AL512347.1-201ENST00000566420 503 ntBASIC3.15□□□□□ -1.91
VCPP55072 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.15□□□□□ -1.91
VCPP55072 DUXAP4-201ENST00000603046 613 ntBASIC3.15□□□□□ -1.91
VCPP55072 AC010738.1-201ENST00000604970 987 ntBASIC3.15□□□□□ -1.91
VCPP55072 AC097478.2-201ENST00000610572 514 ntBASIC3.15□□□□□ -1.91
VCPP55072 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.15□□□□□ -1.91
VCPP55072 AC084035.1-201ENST00000634543 607 ntBASIC3.15□□□□□ -1.91
VCPP55072 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.14□□□□□ -1.91
VCPP55072 AL355596.1-201ENST00000565399 3996 ntBASIC3.14□□□□□ -1.91
VCPP55072 RNU6-173P-201ENST00000364215 104 ntBASIC3.14□□□□□ -1.91
VCPP55072 SNORD51-201ENST00000384320 80 ntBASIC3.14□□□□□ -1.91
VCPP55072 RNA5SP252-201ENST00000391131 119 ntBASIC3.14□□□□□ -1.91
VCPP55072 RN7SKP58-201ENST00000411010 305 ntBASIC3.14□□□□□ -1.91
VCPP55072 AL139421.1-201ENST00000423010 169 ntBASIC3.14□□□□□ -1.91
VCPP55072 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.14□□□□□ -1.91
VCPP55072 AC063976.3-201ENST00000426849 329 ntBASIC3.14□□□□□ -1.91
VCPP55072 RPL23AP58-201ENST00000440453 469 ntBASIC3.14□□□□□ -1.91
VCPP55072 FGF7P5-201ENST00000441829 291 ntBASIC3.14□□□□□ -1.91
VCPP55072 OR6K5P-201ENST00000447050 945 ntBASIC3.14□□□□□ -1.91
VCPP55072 AC005297.2-201ENST00000450430 606 ntBASIC3.14□□□□□ -1.91
VCPP55072 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.14□□□□□ -1.91
VCPP55072 AC091951.3-201ENST00000504093 246 ntBASIC3.14□□□□□ -1.91
VCPP55072 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.14□□□□□ -1.91
VCPP55072 AC010625.1-201ENST00000511296 403 ntBASIC3.14□□□□□ -1.91
VCPP55072 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.14□□□□□ -1.91
VCPP55072 Y_RNA.676-201ENST00000516393 96 ntBASIC3.14□□□□□ -1.91
VCPP55072 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VCPP55072 MTND1P24-201ENST00000552175 861 ntBASIC3.14□□□□□ -1.91
VCPP55072 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.14□□□□□ -1.91
VCPP55072 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.14□□□□□ -1.91
VCPP55072 AC009712.1-201ENST00000564938 316 ntBASIC3.14□□□□□ -1.91
VCPP55072 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.14□□□□□ -1.91
VCPP55072 CYCSP39-201ENST00000565821 309 ntBASIC3.14□□□□□ -1.91
VCPP55072 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.14□□□□□ -1.91
VCPP55072 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.14□□□□□ -1.91
VCPP55072 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms