Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 USP9YP34-201ENST00000453983 808 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 snoU13.4-201ENST00000458916 104 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 AC010468.1-201ENST00000461022 817 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 RN7SL75P-201ENST00000461926 281 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 RPS15AP17-201ENST00000470598 390 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 AC012181.1-201ENST00000479895 423 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.09□□□□□ -1.91
HMGCS2P54868 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HMGCS2P54868 KCTD9P5-201ENST00000504141 1170 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 AC004062.1-201ENST00000509926 645 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.09□□□□□ -1.91
HMGCS2P54868 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.09□□□□□ -1.91
HMGCS2P54868 RPL7P20-201ENST00000520308 745 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.09□□□□□ -1.91
HMGCS2P54868 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
HMGCS2P54868 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.09□□□□□ -1.91
HMGCS2P54868 AL163153.1-201ENST00000554223 283 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.09□□□□□ -1.91
HMGCS2P54868 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.09□□□□□ -1.91
HMGCS2P54868 AC145350.1-201ENST00000567426 208 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 SNORD53-201ENST00000579969 78 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.09□□□□□ -1.91
HMGCS2P54868 MIR4637-201ENST00000582405 84 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 AP001029.3-201ENST00000588063 596 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 AC008751.2-201ENST00000597885 980 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 NIFKP6-201ENST00000598115 845 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.09□□□□□ -1.91
HMGCS2P54868 AC243773.3-201ENST00000613270 256 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 Z99129.2-201ENST00000619967 314 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.09□□□□□ -1.91
HMGCS2P54868 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.09□□□□□ -1.91
HMGCS2P54868 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.09□□□□□ -1.92
HMGCS2P54868 AC002546.1-201ENST00000588041 2504 ntBASIC3.09□□□□□ -1.92
HMGCS2P54868 SGO1P2-201ENST00000429458 1589 ntBASIC3.08□□□□□ -1.92
HMGCS2P54868 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HMGCS2P54868 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HMGCS2P54868 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HMGCS2P54868 RNU6-1122P-201ENST00000384449 107 ntBASIC3.08□□□□□ -1.92
HMGCS2P54868 DHFRP6-201ENST00000401776 268 ntBASIC3.08□□□□□ -1.92
HMGCS2P54868 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.08□□□□□ -1.92
HMGCS2P54868 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.08□□□□□ -1.92
HMGCS2P54868 NPM1P11-201ENST00000417106 855 ntBASIC3.08□□□□□ -1.92
HMGCS2P54868 MTCYBP38-201ENST00000417160 1123 ntBASIC3.08□□□□□ -1.92
HMGCS2P54868 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.08□□□□□ -1.92
HMGCS2P54868 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.08□□□□□ -1.92
HMGCS2P54868 AC011233.1-201ENST00000422812 283 ntBASIC3.08□□□□□ -1.92
HMGCS2P54868 AC006548.1-201ENST00000427470 102 ntBASIC3.08□□□□□ -1.92
HMGCS2P54868 TXNL1P1-201ENST00000429528 554 ntBASIC3.08□□□□□ -1.92
HMGCS2P54868 CETN4P-201ENST00000432407 469 ntBASIC3.08□□□□□ -1.92
HMGCS2P54868 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.08□□□□□ -1.92
HMGCS2P54868 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.08□□□□□ -1.92
HMGCS2P54868 TMEM251P1-201ENST00000503717 318 ntBASIC3.08□□□□□ -1.92
HMGCS2P54868 AC093767.1-201ENST00000504523 156 ntBASIC3.08□□□□□ -1.92
HMGCS2P54868 YWHAEP4-201ENST00000505390 198 ntBASIC3.08□□□□□ -1.92
HMGCS2P54868 XKRY-201ENST00000510392 1100 ntBASIC3.08□□□□□ -1.92
HMGCS2P54868 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.08□□□□□ -1.92
HMGCS2P54868 AC245166.1-201ENST00000521012 253 ntBASIC3.08□□□□□ -1.92
HMGCS2P54868 DEFB131D-201ENST00000526803 184 ntBASIC3.08□□□□□ -1.92
HMGCS2P54868 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
HMGCS2P54868 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.08□□□□□ -1.92
HMGCS2P54868 CYCSP2-201ENST00000558168 301 ntBASIC3.08□□□□□ -1.92
HMGCS2P54868 HSPE1P3-201ENST00000559254 309 ntBASIC3.08□□□□□ -1.92
HMGCS2P54868 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.08□□□□□ -1.92
HMGCS2P54868 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.08□□□□□ -1.92
HMGCS2P54868 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.08□□□□□ -1.92
HMGCS2P54868 AC128687.1-201ENST00000605304 619 ntBASIC3.08□□□□□ -1.92
HMGCS2P54868 AC006270.3-201ENST00000605967 1036 ntBASIC3.08□□□□□ -1.92
HMGCS2P54868 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.08□□□□□ -1.92
HMGCS2P54868 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.08□□□□□ -1.92
HMGCS2P54868 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.08□□□□□ -1.92
HMGCS2P54868 AC064859.1-201ENST00000624741 174 ntBASIC3.08□□□□□ -1.92
HMGCS2P54868 CR381572.1-201ENST00000625098 102 ntBASIC3.08□□□□□ -1.92
HMGCS2P54868 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.08□□□□□ -1.92
HMGCS2P54868 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HMGCS2P54868 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HMGCS2P54868 AP002907.1-201ENST00000606361 1430 ntBASIC3.08□□□□□ -1.92
HMGCS2P54868 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.08□□□□□ -1.92
HMGCS2P54868 MTCO1P23-201ENST00000415223 1526 ntBASIC3.08□□□□□ -1.92
HMGCS2P54868 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HMGCS2P54868 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HMGCS2P54868 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.08□□□□□ -1.92
HMGCS2P54868 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HMGCS2P54868 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGCS2P54868 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGCS2P54868 RNA5SP432-201ENST00000362480 116 ntBASIC3.07□□□□□ -1.92
HMGCS2P54868 SNORD62.1-201ENST00000362541 86 ntBASIC3.07□□□□□ -1.92
HMGCS2P54868 RNU6-805P-201ENST00000365643 106 ntBASIC3.07□□□□□ -1.92
HMGCS2P54868 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGCS2P54868 RNU6-1200P-201ENST00000384162 107 ntBASIC3.07□□□□□ -1.92
HMGCS2P54868 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGCS2P54868 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.07□□□□□ -1.92
HMGCS2P54868 RPS15AP6-201ENST00000420703 385 ntBASIC3.07□□□□□ -1.92
HMGCS2P54868 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.07□□□□□ -1.92
HMGCS2P54868 MTCYBP3-201ENST00000445588 1137 ntBASIC3.07□□□□□ -1.92
HMGCS2P54868 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGCS2P54868 AL513124.1-201ENST00000450410 614 ntBASIC3.07□□□□□ -1.92
HMGCS2P54868 AL109741.2-201ENST00000455561 343 ntBASIC3.07□□□□□ -1.92
HMGCS2P54868 AC026410.2-201ENST00000460281 156 ntBASIC3.07□□□□□ -1.92
HMGCS2P54868 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGCS2P54868 AC008549.1-201ENST00000512900 643 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms