Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 IGKV2D-36-201ENST00000518643 226 ntBASIC2.31□□□□□ -2.04
COL18A1P39060 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.31□□□□□ -2.04
COL18A1P39060 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.31□□□□□ -2.04
COL18A1P39060 AL035411.2-201ENST00000604022 421 ntBASIC2.31□□□□□ -2.04
COL18A1P39060 AC112503.2-201ENST00000609005 552 ntBASIC2.31□□□□□ -2.04
COL18A1P39060 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.31□□□□□ -2.04
COL18A1P39060 AL355578.1-201ENST00000607405 1328 ntBASIC2.31□□□□□ -2.04
COL18A1P39060 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
COL18A1P39060 RNU6-629P-201ENST00000384061 103 ntBASIC2.31□□□□□ -2.04
COL18A1P39060 RNU6-1151P-201ENST00000384684 107 ntBASIC2.31□□□□□ -2.04
COL18A1P39060 RNU6-837P-201ENST00000391056 108 ntBASIC2.31□□□□□ -2.04
COL18A1P39060 RPS7P9-201ENST00000414704 586 ntBASIC2.31□□□□□ -2.04
COL18A1P39060 RAD23BP2-201ENST00000416003 1207 ntBASIC2.31□□□□□ -2.04
COL18A1P39060 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.31□□□□□ -2.04
COL18A1P39060 MTND1P33-201ENST00000446251 917 ntBASIC2.31□□□□□ -2.04
COL18A1P39060 MTCYBP17-201ENST00000503579 789 ntBASIC2.31□□□□□ -2.04
COL18A1P39060 AF279873.1-201ENST00000523393 313 ntBASIC2.31□□□□□ -2.04
COL18A1P39060 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.31□□□□□ -2.04
COL18A1P39060 VN1R88P-201ENST00000596787 292 ntBASIC2.31□□□□□ -2.04
COL18A1P39060 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.31□□□□□ -2.04
COL18A1P39060 BX248123.2-201ENST00000606318 124 ntBASIC2.31□□□□□ -2.04
COL18A1P39060 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
COL18A1P39060 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.3□□□□□ -2.04
COL18A1P39060 MIRLET7G-201ENST00000362280 84 ntBASIC2.3□□□□□ -2.04
COL18A1P39060 RNU6-50P-201ENST00000362356 103 ntBASIC2.3□□□□□ -2.04
COL18A1P39060 RNU1-57P-201ENST00000384491 166 ntBASIC2.3□□□□□ -2.04
COL18A1P39060 MT-TC-201ENST00000387405 66 ntBASIC2.3□□□□□ -2.04
COL18A1P39060 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
COL18A1P39060 AC096632.1-201ENST00000427395 310 ntBASIC2.3□□□□□ -2.04
COL18A1P39060 AL645568.3-201ENST00000433683 316 ntBASIC2.3□□□□□ -2.04
COL18A1P39060 AC092170.1-201ENST00000440211 356 ntBASIC2.3□□□□□ -2.04
COL18A1P39060 HSPE1P28-201ENST00000443139 211 ntBASIC2.3□□□□□ -2.04
COL18A1P39060 AC027673.1-201ENST00000456245 405 ntBASIC2.3□□□□□ -2.04
COL18A1P39060 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.3□□□□□ -2.04
COL18A1P39060 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.3□□□□□ -2.04
COL18A1P39060 OR8K4P-201ENST00000534608 872 ntBASIC2.3□□□□□ -2.04
COL18A1P39060 AC092470.1-201ENST00000546187 132 ntBASIC2.3□□□□□ -2.04
COL18A1P39060 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.3□□□□□ -2.04
COL18A1P39060 OR4H6P-202ENST00000603819 340 ntBASIC2.3□□□□□ -2.04
COL18A1P39060 AL450270.1-201ENST00000606160 391 ntBASIC2.3□□□□□ -2.04
COL18A1P39060 AC016877.3-201ENST00000606778 504 ntBASIC2.3□□□□□ -2.04
COL18A1P39060 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.3□□□□□ -2.04
COL18A1P39060 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.3□□□□□ -2.04
COL18A1P39060 AL356118.1-201ENST00000635272 1078 ntBASIC2.3□□□□□ -2.04
COL18A1P39060 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.3□□□□□ -2.04
COL18A1P39060 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
COL18A1P39060 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.3□□□□□ -2.04
COL18A1P39060 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
COL18A1P39060 OR5T3-201ENST00000303059 1023 ntBASIC2.29□□□□□ -2.04
COL18A1P39060 RNU6-392P-201ENST00000364926 101 ntBASIC2.29□□□□□ -2.04
COL18A1P39060 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
COL18A1P39060 AC006548.1-201ENST00000427470 102 ntBASIC2.29□□□□□ -2.04
COL18A1P39060 DNAJC19P4-201ENST00000440115 345 ntBASIC2.29□□□□□ -2.04
COL18A1P39060 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.29□□□□□ -2.04
COL18A1P39060 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.29□□□□□ -2.04
COL18A1P39060 BX248409.1-201ENST00000455497 255 ntBASIC2.29□□□□□ -2.04
COL18A1P39060 ARPC3P2-201ENST00000457786 533 ntBASIC2.29□□□□□ -2.04
COL18A1P39060 AC092798.1-201ENST00000458542 409 ntBASIC2.29□□□□□ -2.04
COL18A1P39060 RNU6-1073P-201ENST00000517182 106 ntBASIC2.29□□□□□ -2.04
COL18A1P39060 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.29□□□□□ -2.04
COL18A1P39060 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.29□□□□□ -2.04
COL18A1P39060 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.29□□□□□ -2.04
COL18A1P39060 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.29□□□□□ -2.04
COL18A1P39060 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.29□□□□□ -2.04
COL18A1P39060 AC040174.2-201ENST00000602701 465 ntBASIC2.29□□□□□ -2.04
COL18A1P39060 AL645939.4-201ENST00000604495 135 ntBASIC2.29□□□□□ -2.04
COL18A1P39060 DPRXP5-201ENST00000604662 539 ntBASIC2.29□□□□□ -2.04
COL18A1P39060 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.29□□□□□ -2.04
COL18A1P39060 CR381572.1-201ENST00000625098 102 ntBASIC2.29□□□□□ -2.04
COL18A1P39060 AP000553.5-201ENST00000641933 54 ntBASIC2.29□□□□□ -2.04
COL18A1P39060 AC025263.3-201ENST00000622965 1396 ntBASIC2.29□□□□□ -2.04
COL18A1P39060 AC005336.3-201ENST00000623833 2679 ntBASIC2.29□□□□□ -2.04
COL18A1P39060 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.29□□□□□ -2.04
COL18A1P39060 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
COL18A1P39060 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
COL18A1P39060 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
COL18A1P39060 RNU4-13P-201ENST00000364019 141 ntBASIC2.28□□□□□ -2.04
COL18A1P39060 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.28□□□□□ -2.04
COL18A1P39060 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.28□□□□□ -2.04
COL18A1P39060 MORF4L1P7-201ENST00000426038 703 ntBASIC2.28□□□□□ -2.04
COL18A1P39060 RPL36P19-201ENST00000430744 301 ntBASIC2.28□□□□□ -2.04
COL18A1P39060 RPS7P2-201ENST00000435134 607 ntBASIC2.28□□□□□ -2.04
COL18A1P39060 RPL23AP16-201ENST00000441715 421 ntBASIC2.28□□□□□ -2.04
COL18A1P39060 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.28□□□□□ -2.04
COL18A1P39060 AC015724.1-201ENST00000478577 156 ntBASIC2.28□□□□□ -2.04
COL18A1P39060 HIGD1AP6-201ENST00000521833 279 ntBASIC2.28□□□□□ -2.04
COL18A1P39060 AC124293.1-201ENST00000530034 493 ntBASIC2.28□□□□□ -2.04
COL18A1P39060 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.28□□□□□ -2.04
COL18A1P39060 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.28□□□□□ -2.04
COL18A1P39060 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
COL18A1P39060 AP001029.3-201ENST00000588063 596 ntBASIC2.28□□□□□ -2.04
COL18A1P39060 AC113368.1-201ENST00000603736 382 ntBASIC2.28□□□□□ -2.04
COL18A1P39060 AC012467.1-201ENST00000607740 256 ntBASIC2.28□□□□□ -2.04
COL18A1P39060 AC096586.1-201ENST00000610267 561 ntBASIC2.28□□□□□ -2.04
COL18A1P39060 AL590282.1-201ENST00000610379 1136 ntBASIC2.28□□□□□ -2.04
COL18A1P39060 MIR6504-201ENST00000613520 61 ntBASIC2.28□□□□□ -2.04
COL18A1P39060 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
COL18A1P39060 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
COL18A1P39060 CKAP2P1-201ENST00000555477 2049 ntBASIC2.28□□□□□ -2.04
COL18A1P39060 AC012321.1-201ENST00000561622 1588 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms