Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 OR5H15-201ENST00000383696 930 ntBASIC2.58□□□□□ -2
BRCA1P38398 Y_RNA.493-201ENST00000384422 102 ntBASIC2.58□□□□□ -2
BRCA1P38398 RPL23AP47-201ENST00000408017 460 ntBASIC2.58□□□□□ -2
BRCA1P38398 RNU4-62P-201ENST00000410125 130 ntBASIC2.58□□□□□ -2
BRCA1P38398 RNU6-1140P-201ENST00000410517 106 ntBASIC2.58□□□□□ -2
BRCA1P38398 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.58□□□□□ -2
BRCA1P38398 TAF13P2-201ENST00000416876 286 ntBASIC2.58□□□□□ -2
BRCA1P38398 RPS3AP9-201ENST00000417027 792 ntBASIC2.58□□□□□ -2
BRCA1P38398 SFR1P2-201ENST00000421841 730 ntBASIC2.58□□□□□ -2
BRCA1P38398 RPS6P14-201ENST00000425165 719 ntBASIC2.58□□□□□ -2
BRCA1P38398 NDUFB4P6-201ENST00000436819 366 ntBASIC2.58□□□□□ -2
BRCA1P38398 AC003989.2-201ENST00000440224 169 ntBASIC2.58□□□□□ -2
BRCA1P38398 RPS26P30-201ENST00000443431 335 ntBASIC2.58□□□□□ -2
BRCA1P38398 AP001804.3-201ENST00000525146 880 ntBASIC2.58□□□□□ -2
BRCA1P38398 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.58□□□□□ -2
BRCA1P38398 NDUFA5P6-201ENST00000542110 379 ntBASIC2.58□□□□□ -2
BRCA1P38398 AC093519.1-201ENST00000566109 298 ntBASIC2.58□□□□□ -2
BRCA1P38398 SNORD39.3-201ENST00000584451 71 ntBASIC2.58□□□□□ -2
BRCA1P38398 AL645944.1-201ENST00000603857 493 ntBASIC2.58□□□□□ -2
BRCA1P38398 AP005229.2-201ENST00000609980 697 ntBASIC2.58□□□□□ -2
BRCA1P38398 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.58□□□□□ -2
BRCA1P38398 AC018755.4-201ENST00000619715 454 ntBASIC2.58□□□□□ -2
BRCA1P38398 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.58□□□□□ -2
BRCA1P38398 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.58□□□□□ -2
BRCA1P38398 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
BRCA1P38398 AC092447.7-201ENST00000422212 1621 ntBASIC2.58□□□□□ -2
BRCA1P38398 AC006378.2-201ENST00000623178 2476 ntBASIC2.58□□□□□ -2
BRCA1P38398 RN7SKP226-201ENST00000364912 300 ntBASIC2.58□□□□□ -2
BRCA1P38398 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.58□□□□□ -2
BRCA1P38398 AC018630.2-202ENST00000422992 927 ntBASIC2.58□□□□□ -2
BRCA1P38398 AC011753.1-201ENST00000451001 220 ntBASIC2.58□□□□□ -2
BRCA1P38398 SSXP4-201ENST00000451349 245 ntBASIC2.58□□□□□ -2
BRCA1P38398 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.58□□□□□ -2
BRCA1P38398 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.58□□□□□ -2
BRCA1P38398 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.58□□□□□ -2
BRCA1P38398 MED28P6-201ENST00000558776 231 ntBASIC2.58□□□□□ -2
BRCA1P38398 AC110588.1-201ENST00000559699 137 ntBASIC2.58□□□□□ -2
BRCA1P38398 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.58□□□□□ -2
BRCA1P38398 MIR8084-201ENST00000614105 89 ntBASIC2.58□□□□□ -2
BRCA1P38398 YWHAEP7-203ENST00000622054 312 ntBASIC2.58□□□□□ -2
BRCA1P38398 AC095031.1-201ENST00000623685 672 ntBASIC2.58□□□□□ -2
BRCA1P38398 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
BRCA1P38398 AL353746.1-201ENST00000566293 6881 ntBASIC2.57□□□□□ -2
BRCA1P38398 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.57□□□□□ -2
BRCA1P38398 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
BRCA1P38398 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
BRCA1P38398 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
BRCA1P38398 U8.10-201ENST00000384260 133 ntBASIC2.57□□□□□ -2
BRCA1P38398 MIR7-2-201ENST00000384970 110 ntBASIC2.57□□□□□ -2
BRCA1P38398 AL354719.1-201ENST00000406535 843 ntBASIC2.57□□□□□ -2
BRCA1P38398 AL591034.1-201ENST00000407447 340 ntBASIC2.57□□□□□ -2
BRCA1P38398 RPS15AP38-201ENST00000413110 372 ntBASIC2.57□□□□□ -2
BRCA1P38398 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.57□□□□□ -2
BRCA1P38398 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.57□□□□□ -2
BRCA1P38398 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.57□□□□□ -2
BRCA1P38398 AL353729.1-201ENST00000425044 720 ntBASIC2.57□□□□□ -2
BRCA1P38398 AC234781.2-201ENST00000426370 994 ntBASIC2.57□□□□□ -2
BRCA1P38398 MTCYBP15-201ENST00000433123 1127 ntBASIC2.57□□□□□ -2
BRCA1P38398 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.57□□□□□ -2
BRCA1P38398 AL645638.1-201ENST00000440519 361 ntBASIC2.57□□□□□ -2
BRCA1P38398 AC008571.1-201ENST00000467232 300 ntBASIC2.57□□□□□ -2
BRCA1P38398 NCOR1P1-202ENST00000486162 291 ntBASIC2.57□□□□□ -2
BRCA1P38398 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.57□□□□□ -2
BRCA1P38398 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.57□□□□□ -2
BRCA1P38398 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.57□□□□□ -2
BRCA1P38398 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.57□□□□□ -2
BRCA1P38398 AC006116.7-201ENST00000590141 756 ntBASIC2.57□□□□□ -2
BRCA1P38398 AL359821.1-201ENST00000605519 182 ntBASIC2.57□□□□□ -2
BRCA1P38398 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
BRCA1P38398 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
BRCA1P38398 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.57□□□□□ -2
BRCA1P38398 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
BRCA1P38398 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.57□□□□□ -2
BRCA1P38398 RNA5SP258-201ENST00000362750 119 ntBASIC2.56□□□□□ -2
BRCA1P38398 RNU6-799P-201ENST00000363567 107 ntBASIC2.56□□□□□ -2
BRCA1P38398 MTATP6P4-201ENST00000427725 675 ntBASIC2.56□□□□□ -2
BRCA1P38398 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.56□□□□□ -2
BRCA1P38398 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.56□□□□□ -2
BRCA1P38398 AL118520.1-201ENST00000450770 291 ntBASIC2.56□□□□□ -2
BRCA1P38398 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.56□□□□□ -2
BRCA1P38398 AP000705.1-201ENST00000454567 350 ntBASIC2.56□□□□□ -2
BRCA1P38398 snoU13.4-201ENST00000458916 104 ntBASIC2.56□□□□□ -2
BRCA1P38398 snoU109.4-201ENST00000458953 143 ntBASIC2.56□□□□□ -2
BRCA1P38398 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.56□□□□□ -2
BRCA1P38398 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.56□□□□□ -2
BRCA1P38398 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.56□□□□□ -2
BRCA1P38398 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.56□□□□□ -2
BRCA1P38398 SUB1P3-201ENST00000564581 315 ntBASIC2.56□□□□□ -2
BRCA1P38398 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
BRCA1P38398 AC023043.3-201ENST00000593113 385 ntBASIC2.56□□□□□ -2
BRCA1P38398 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.56□□□□□ -2
BRCA1P38398 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
BRCA1P38398 AC103988.1-201ENST00000566382 2177 ntBASIC2.56□□□□□ -2
BRCA1P38398 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
BRCA1P38398 AC004520.1-201ENST00000608362 1413 ntBASIC2.56□□□□□ -2
BRCA1P38398 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
BRCA1P38398 U8.9-201ENST00000365667 134 ntBASIC2.56□□□□□ -2
BRCA1P38398 MIR9-3-201ENST00000385084 90 ntBASIC2.56□□□□□ -2
BRCA1P38398 SNORA40.18-201ENST00000391200 128 ntBASIC2.56□□□□□ -2
BRCA1P38398 AL023807.1-201ENST00000407932 359 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms