Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
SCN4AP35499 RNU6-792P-201ENST00000363490 107 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 RNU5B-4P-201ENST00000363508 111 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 U6.112-201ENST00000384129 70 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 SNORA51.12-201ENST00000384448 134 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 AL035405.1-201ENST00000400795 710 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 TMSB4XP8-201ENST00000402089 135 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.45□□□□□ -2.02
SCN4AP35499 TMSB4XP6-201ENST00000415187 135 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 SSXP9-201ENST00000417503 292 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 BTF3P4-201ENST00000418852 495 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 TMSB4XP1-201ENST00000424567 135 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 AP000949.1-201ENST00000438328 629 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 RAB11AP1-201ENST00000442978 646 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 RPS15AP1-201ENST00000457423 391 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 RPS27P23-201ENST00000487608 251 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SCN4AP35499 GTF2IP9-201ENST00000502460 301 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SCN4AP35499 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SCN4AP35499 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SCN4AP35499 MTND1P36-201ENST00000522384 936 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 AC104115.2-201ENST00000523026 687 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 MTCO3P15-201ENST00000526563 574 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.45□□□□□ -2.02
SCN4AP35499 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.45□□□□□ -2.02
SCN4AP35499 AC133794.1-201ENST00000602731 914 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 AC024257.5-201ENST00000612739 531 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 YWHAEP7-203ENST00000622054 312 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.44□□□□□ -2.02
SCN4AP35499 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SCN4AP35499 RNU6-1066P-201ENST00000363573 105 ntBASIC2.44□□□□□ -2.02
SCN4AP35499 RNU6-619P-201ENST00000365146 108 ntBASIC2.44□□□□□ -2.02
SCN4AP35499 SNORA67.5-201ENST00000391036 107 ntBASIC2.44□□□□□ -2.02
SCN4AP35499 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.44□□□□□ -2.02
SCN4AP35499 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.44□□□□□ -2.02
SCN4AP35499 AC005345.1-201ENST00000431868 217 ntBASIC2.44□□□□□ -2.02
SCN4AP35499 NANOGP2-201ENST00000435391 727 ntBASIC2.44□□□□□ -2.02
SCN4AP35499 AL109741.2-201ENST00000455561 343 ntBASIC2.44□□□□□ -2.02
SCN4AP35499 ARPC3P2-201ENST00000457786 533 ntBASIC2.44□□□□□ -2.02
SCN4AP35499 AC011352.3-201ENST00000505162 593 ntBASIC2.44□□□□□ -2.02
SCN4AP35499 BOLA3P3-201ENST00000505182 232 ntBASIC2.44□□□□□ -2.02
SCN4AP35499 RN7SKP234-201ENST00000517173 224 ntBASIC2.44□□□□□ -2.02
SCN4AP35499 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.44□□□□□ -2.02
SCN4AP35499 NDUFA5P6-201ENST00000542110 379 ntBASIC2.44□□□□□ -2.02
SCN4AP35499 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.44□□□□□ -2.02
SCN4AP35499 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.44□□□□□ -2.02
SCN4AP35499 AC093510.2-201ENST00000562820 896 ntBASIC2.44□□□□□ -2.02
SCN4AP35499 AC090330.1-201ENST00000588646 764 ntBASIC2.44□□□□□ -2.02
SCN4AP35499 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.44□□□□□ -2.02
SCN4AP35499 AL606834.3-201ENST00000602615 496 ntBASIC2.44□□□□□ -2.02
SCN4AP35499 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.44□□□□□ -2.02
SCN4AP35499 AC010733.2-201ENST00000589496 5702 ntBASIC2.44□□□□□ -2.02
SCN4AP35499 SGO1P1-201ENST00000603525 1447 ntBASIC2.44□□□□□ -2.02
SCN4AP35499 PABPC1P7-201ENST00000413177 1513 ntBASIC2.44□□□□□ -2.02
SCN4AP35499 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SCN4AP35499 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SCN4AP35499 RNU6-560P-201ENST00000364007 108 ntBASIC2.43□□□□□ -2.02
SCN4AP35499 RPS7P2-201ENST00000435134 607 ntBASIC2.43□□□□□ -2.02
SCN4AP35499 BX248409.1-201ENST00000455497 255 ntBASIC2.43□□□□□ -2.02
SCN4AP35499 AP000873.1-201ENST00000463987 400 ntBASIC2.43□□□□□ -2.02
SCN4AP35499 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.43□□□□□ -2.02
SCN4AP35499 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.43□□□□□ -2.02
SCN4AP35499 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.43□□□□□ -2.02
SCN4AP35499 RNA5SP182-201ENST00000516064 82 ntBASIC2.43□□□□□ -2.02
SCN4AP35499 OR8K4P-201ENST00000534608 872 ntBASIC2.43□□□□□ -2.02
SCN4AP35499 PRELID2P1-201ENST00000552837 301 ntBASIC2.43□□□□□ -2.02
SCN4AP35499 MIR4255-201ENST00000579351 72 ntBASIC2.43□□□□□ -2.02
SCN4AP35499 AC126365.2-201ENST00000580630 379 ntBASIC2.43□□□□□ -2.02
SCN4AP35499 SNRPGP15-201ENST00000600149 222 ntBASIC2.43□□□□□ -2.02
SCN4AP35499 AC016542.1-201ENST00000608259 493 ntBASIC2.43□□□□□ -2.02
SCN4AP35499 AC253576.2-201ENST00000618815 580 ntBASIC2.43□□□□□ -2.02
SCN4AP35499 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
SCN4AP35499 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.43□□□□□ -2.02
SCN4AP35499 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
SCN4AP35499 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
SCN4AP35499 SNORA31-201ENST00000362607 130 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 RNA5SP295-201ENST00000362655 121 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.42□□□□□ -2.02
SCN4AP35499 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SCN4AP35499 USP9YP27-201ENST00000418455 438 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 SFR1P2-201ENST00000421841 730 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 AC245517.4-201ENST00000448601 281 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.42□□□□□ -2.02
SCN4AP35499 Z99714.1-201ENST00000450463 807 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 RFC5P1-201ENST00000454419 874 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.42□□□□□ -2.02
SCN4AP35499 MTCO1P42-201ENST00000457379 726 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 RPS20P24-201ENST00000457473 361 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 RPL21P39-201ENST00000463605 483 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.42□□□□□ -2.02
SCN4AP35499 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.42□□□□□ -2.02
SCN4AP35499 AC006270.2-201ENST00000578523 652 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 MIR3683-201ENST00000580847 82 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.42□□□□□ -2.02
SCN4AP35499 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.42□□□□□ -2.02
SCN4AP35499 AL009028.1-201ENST00000604895 802 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 AC034102.8-201ENST00000615146 484 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 AC018926.1-201ENST00000616335 435 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms