Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 MTND4LP18-201ENST00000526864 291 ntBASIC3.57□□□□□ -1.84
HOXD13P35453 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXD13P35453 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXD13P35453 AL133153.1-201ENST00000557756 303 ntBASIC3.57□□□□□ -1.84
HOXD13P35453 CKS1BP3-201ENST00000600888 237 ntBASIC3.57□□□□□ -1.84
HOXD13P35453 AP000403.1-201ENST00000603349 851 ntBASIC3.57□□□□□ -1.84
HOXD13P35453 SDR42E1P2-201ENST00000614861 481 ntBASIC3.57□□□□□ -1.84
HOXD13P35453 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
HOXD13P35453 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXD13P35453 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HOXD13P35453 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXD13P35453 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HOXD13P35453 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
HOXD13P35453 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.56□□□□□ -1.84
HOXD13P35453 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
HOXD13P35453 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HOXD13P35453 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HOXD13P35453 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HOXD13P35453 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.56□□□□□ -1.84
HOXD13P35453 MIR19A-201ENST00000384878 82 ntBASIC3.56□□□□□ -1.84
HOXD13P35453 Z99497.1-201ENST00000421282 135 ntBASIC3.56□□□□□ -1.84
HOXD13P35453 RPL31P12-201ENST00000422587 358 ntBASIC3.56□□□□□ -1.84
HOXD13P35453 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXD13P35453 AC005326.1-201ENST00000429197 123 ntBASIC3.56□□□□□ -1.84
HOXD13P35453 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXD13P35453 MED14P1-201ENST00000430517 648 ntBASIC3.56□□□□□ -1.84
HOXD13P35453 AL365184.2-201ENST00000431139 435 ntBASIC3.56□□□□□ -1.84
HOXD13P35453 HIGD1AP11-201ENST00000438361 280 ntBASIC3.56□□□□□ -1.84
HOXD13P35453 RPL22P17-201ENST00000438729 315 ntBASIC3.56□□□□□ -1.84
HOXD13P35453 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.56□□□□□ -1.84
HOXD13P35453 MTCO3P45-201ENST00000443036 613 ntBASIC3.56□□□□□ -1.84
HOXD13P35453 AL358232.1-201ENST00000448030 501 ntBASIC3.56□□□□□ -1.84
HOXD13P35453 MTCO1P42-201ENST00000457379 726 ntBASIC3.56□□□□□ -1.84
HOXD13P35453 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXD13P35453 MTCO2P6-201ENST00000463134 685 ntBASIC3.56□□□□□ -1.84
HOXD13P35453 RN7SL442P-201ENST00000473804 320 ntBASIC3.56□□□□□ -1.84
HOXD13P35453 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXD13P35453 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.56□□□□□ -1.84
HOXD13P35453 RNU6-1003P-201ENST00000517099 105 ntBASIC3.56□□□□□ -1.84
HOXD13P35453 AC093331.1-201ENST00000521474 169 ntBASIC3.56□□□□□ -1.84
HOXD13P35453 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HOXD13P35453 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.56□□□□□ -1.84
HOXD13P35453 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXD13P35453 HIGD1AP1-201ENST00000550979 275 ntBASIC3.56□□□□□ -1.84
HOXD13P35453 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.56□□□□□ -1.84
HOXD13P35453 MIR3609-201ENST00000582661 80 ntBASIC3.56□□□□□ -1.84
HOXD13P35453 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXD13P35453 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HOXD13P35453 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXD13P35453 AC090970.3-201ENST00000612566 866 ntBASIC3.56□□□□□ -1.84
HOXD13P35453 AP003485.2-201ENST00000623636 610 ntBASIC3.56□□□□□ -1.84
HOXD13P35453 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXD13P35453 AC073476.4-201ENST00000628409 72 ntBASIC3.56□□□□□ -1.84
HOXD13P35453 AC093591.3-201ENST00000634516 308 ntBASIC3.56□□□□□ -1.84
HOXD13P35453 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HOXD13P35453 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HOXD13P35453 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HOXD13P35453 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HOXD13P35453 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.55□□□□□ -1.84
HOXD13P35453 RNU6-553P-201ENST00000364047 96 ntBASIC3.55□□□□□ -1.84
HOXD13P35453 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HOXD13P35453 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
HOXD13P35453 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HOXD13P35453 Y_RNA.560-201ENST00000384689 102 ntBASIC3.55□□□□□ -1.84
HOXD13P35453 RNVU1-14-201ENST00000384770 164 ntBASIC3.55□□□□□ -1.84
HOXD13P35453 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HOXD13P35453 RNA5SP38-201ENST00000410750 119 ntBASIC3.55□□□□□ -1.84
HOXD13P35453 SPA17P1-201ENST00000416656 452 ntBASIC3.55□□□□□ -1.84
HOXD13P35453 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.55□□□□□ -1.84
HOXD13P35453 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.55□□□□□ -1.84
HOXD13P35453 RPL7P34-201ENST00000433316 712 ntBASIC3.55□□□□□ -1.84
HOXD13P35453 CST9LP2-201ENST00000437612 320 ntBASIC3.55□□□□□ -1.84
HOXD13P35453 FTH1P1-201ENST00000437933 532 ntBASIC3.55□□□□□ -1.84
HOXD13P35453 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXD13P35453 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXD13P35453 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXD13P35453 AC008481.1-201ENST00000463278 396 ntBASIC3.55□□□□□ -1.84
HOXD13P35453 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.55□□□□□ -1.84
HOXD13P35453 AC112204.1-201ENST00000502591 103 ntBASIC3.55□□□□□ -1.84
HOXD13P35453 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXD13P35453 PHBP14-201ENST00000512887 367 ntBASIC3.55□□□□□ -1.84
HOXD13P35453 APOOP4-201ENST00000513530 597 ntBASIC3.55□□□□□ -1.84
HOXD13P35453 RNU6-390P-201ENST00000516259 103 ntBASIC3.55□□□□□ -1.84
HOXD13P35453 RNU6-1256P-201ENST00000516539 103 ntBASIC3.55□□□□□ -1.84
HOXD13P35453 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.55□□□□□ -1.84
HOXD13P35453 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.55□□□□□ -1.84
HOXD13P35453 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.55□□□□□ -1.84
HOXD13P35453 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXD13P35453 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HOXD13P35453 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.55□□□□□ -1.84
HOXD13P35453 AC091489.2-201ENST00000566263 604 ntBASIC3.55□□□□□ -1.84
HOXD13P35453 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXD13P35453 AL031985.2-201ENST00000600955 480 ntBASIC3.55□□□□□ -1.84
HOXD13P35453 AC019176.2-201ENST00000611579 315 ntBASIC3.55□□□□□ -1.84
HOXD13P35453 AC090132.2-201ENST00000615881 347 ntBASIC3.55□□□□□ -1.84
HOXD13P35453 MIR7112-201ENST00000616126 65 ntBASIC3.55□□□□□ -1.84
HOXD13P35453 AC012150.2-201ENST00000621300 544 ntBASIC3.55□□□□□ -1.84
HOXD13P35453 AF246928.1-201ENST00000623768 87 ntBASIC3.55□□□□□ -1.84
HOXD13P35453 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.55□□□□□ -1.84
HOXD13P35453 AC097655.1-201ENST00000635075 318 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms