Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.98□□□□□ -1.77
HOXD12P35452 MIR7702-201ENST00000621931 59 ntBASIC3.98□□□□□ -1.77
HOXD12P35452 AC079597.1-201ENST00000624306 508 ntBASIC3.98□□□□□ -1.77
HOXD12P35452 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXD12P35452 AL157786.1-207ENST00000627771 695 ntBASIC3.98□□□□□ -1.77
HOXD12P35452 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXD12P35452 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.98□□□□□ -1.77
HOXD12P35452 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXD12P35452 AL136164.4-201ENST00000625013 2135 ntBASIC3.98□□□□□ -1.77
HOXD12P35452 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXD12P35452 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXD12P35452 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXD12P35452 AL645937.1-201ENST00000641739 1652 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 ZNF285B-201ENST00000561698 1767 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXD12P35452 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXD12P35452 AL079305.1-201ENST00000623159 3008 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 RNU6-1155P-201ENST00000363554 107 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 Y_RNA.248-201ENST00000364501 109 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 RNU6-359P-201ENST00000365466 108 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXD12P35452 Y_RNA.548-201ENST00000384656 105 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 MIR30B-201ENST00000384850 88 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 U3.20-201ENST00000390909 217 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HOXD12P35452 RNU2-47P-201ENST00000410649 186 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 AC127391.1-201ENST00000411737 98 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXD12P35452 AC007390.1-201ENST00000415722 356 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 BEND7P1-201ENST00000422058 457 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 USP9YP18-201ENST00000425912 695 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 MTCO1P39-201ENST00000426148 480 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 AC091390.3-201ENST00000426478 338 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXD12P35452 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXD12P35452 RPL31P35-201ENST00000431058 377 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXD12P35452 AL596276.1-201ENST00000434465 418 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXD12P35452 AC004866.2-201ENST00000438285 481 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 AC108734.1-201ENST00000439549 399 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXD12P35452 AC079448.1-201ENST00000449377 373 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXD12P35452 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.97□□□□□ -1.77
HOXD12P35452 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXD12P35452 RN7SL330P-201ENST00000469709 307 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 RPS23P3-201ENST00000470993 430 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 RN7SL271P-201ENST00000487601 295 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXD12P35452 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXD12P35452 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXD12P35452 AP003497.1-201ENST00000528472 562 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXD12P35452 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.97□□□□□ -1.77
HOXD12P35452 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXD12P35452 AC234778.2-201ENST00000566241 354 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXD12P35452 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXD12P35452 MIR3118-1-201ENST00000581787 76 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 AC060771.1-201ENST00000582031 164 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXD12P35452 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXD12P35452 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXD12P35452 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXD12P35452 AL391813.2-201ENST00000609113 322 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 BX664608.1-201ENST00000610519 487 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 AL133173.2-201ENST00000614270 90 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 AL590099.1-201ENST00000615276 138 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 AC012150.2-201ENST00000621300 544 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 FP236240.3-201ENST00000623061 327 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXD12P35452 AL034408.1-202ENST00000636088 415 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 U6.98-201ENST00000637157 84 ntBASIC3.97□□□□□ -1.77
HOXD12P35452 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXD12P35452 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXD12P35452 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXD12P35452 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXD12P35452 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXD12P35452 ELF2P3-201ENST00000445099 1506 ntBASIC3.96□□□□□ -1.78
HOXD12P35452 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXD12P35452 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXD12P35452 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HOXD12P35452 RPL21P17-201ENST00000397467 475 ntBASIC3.96□□□□□ -1.78
HOXD12P35452 AC079780.1-201ENST00000428259 207 ntBASIC3.96□□□□□ -1.78
HOXD12P35452 AC091286.1-201ENST00000431233 461 ntBASIC3.96□□□□□ -1.78
HOXD12P35452 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.96□□□□□ -1.78
HOXD12P35452 AC104850.1-201ENST00000435940 476 ntBASIC3.96□□□□□ -1.78
HOXD12P35452 AL049734.2-201ENST00000441066 616 ntBASIC3.96□□□□□ -1.78
HOXD12P35452 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXD12P35452 Z99127.3-201ENST00000448158 395 ntBASIC3.96□□□□□ -1.78
HOXD12P35452 HMGB3P8-201ENST00000449709 577 ntBASIC3.96□□□□□ -1.78
HOXD12P35452 AC104308.1-201ENST00000454621 333 ntBASIC3.96□□□□□ -1.78
HOXD12P35452 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.96□□□□□ -1.78
HOXD12P35452 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXD12P35452 AC114967.1-201ENST00000504890 259 ntBASIC3.96□□□□□ -1.78
HOXD12P35452 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.96□□□□□ -1.78
HOXD12P35452 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.96□□□□□ -1.78
HOXD12P35452 AC010493.1-201ENST00000513479 292 ntBASIC3.96□□□□□ -1.78
HOXD12P35452 FAM92A1P1-201ENST00000528023 890 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms