Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DPA1P20036 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.11□□□□□ -1.91
HLA-DPA1P20036 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.11□□□□□ -1.91
HLA-DPA1P20036 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.11□□□□□ -1.91
HLA-DPA1P20036 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.11□□□□□ -1.91
HLA-DPA1P20036 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DPA1P20036 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.11□□□□□ -1.91
HLA-DPA1P20036 UBL5P2-201ENST00000583788 219 ntBASIC3.11□□□□□ -1.91
HLA-DPA1P20036 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DPA1P20036 AC012493.2-201ENST00000595083 291 ntBASIC3.11□□□□□ -1.91
HLA-DPA1P20036 AC091057.2-201ENST00000602594 792 ntBASIC3.11□□□□□ -1.91
HLA-DPA1P20036 AL136363.1-201ENST00000605349 337 ntBASIC3.11□□□□□ -1.91
HLA-DPA1P20036 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DPA1P20036 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DPA1P20036 AC004972.1-201ENST00000623934 2209 ntBASIC3.11□□□□□ -1.91
HLA-DPA1P20036 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DPA1P20036 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DPA1P20036 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DPA1P20036 ZNF29P-201ENST00000225587 168 ntBASIC3.1□□□□□ -1.91
HLA-DPA1P20036 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HLA-DPA1P20036 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DPA1P20036 MIR767-201ENST00000390228 109 ntBASIC3.1□□□□□ -1.91
HLA-DPA1P20036 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DPA1P20036 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.1□□□□□ -1.91
HLA-DPA1P20036 AC245054.2-201ENST00000415639 319 ntBASIC3.1□□□□□ -1.91
HLA-DPA1P20036 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DPA1P20036 MTCO2P20-201ENST00000437339 673 ntBASIC3.1□□□□□ -1.91
HLA-DPA1P20036 MTND3P1-201ENST00000441336 220 ntBASIC3.1□□□□□ -1.91
HLA-DPA1P20036 UBBP3-201ENST00000445497 241 ntBASIC3.1□□□□□ -1.91
HLA-DPA1P20036 MTCO1P27-201ENST00000448269 226 ntBASIC3.1□□□□□ -1.91
HLA-DPA1P20036 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.1□□□□□ -1.91
HLA-DPA1P20036 KC877373.1-201ENST00000479066 408 ntBASIC3.1□□□□□ -1.91
HLA-DPA1P20036 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DPA1P20036 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.1□□□□□ -1.91
HLA-DPA1P20036 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.1□□□□□ -1.91
HLA-DPA1P20036 SNORA74D-201ENST00000516404 141 ntBASIC3.1□□□□□ -1.91
HLA-DPA1P20036 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DPA1P20036 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.1□□□□□ -1.91
HLA-DPA1P20036 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DPA1P20036 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DPA1P20036 AC006504.3-201ENST00000586818 523 ntBASIC3.1□□□□□ -1.91
HLA-DPA1P20036 TPMTP1-201ENST00000592307 737 ntBASIC3.1□□□□□ -1.91
HLA-DPA1P20036 AC002545.1-201ENST00000592511 181 ntBASIC3.1□□□□□ -1.91
HLA-DPA1P20036 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.1□□□□□ -1.91
HLA-DPA1P20036 RPP40P2-201ENST00000603596 712 ntBASIC3.1□□□□□ -1.91
HLA-DPA1P20036 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.1□□□□□ -1.91
HLA-DPA1P20036 AL161729.4-201ENST00000604650 476 ntBASIC3.1□□□□□ -1.91
HLA-DPA1P20036 AL035413.2-201ENST00000604801 525 ntBASIC3.1□□□□□ -1.91
HLA-DPA1P20036 AC106052.1-201ENST00000608029 497 ntBASIC3.1□□□□□ -1.91
HLA-DPA1P20036 AC097478.2-201ENST00000610572 514 ntBASIC3.1□□□□□ -1.91
HLA-DPA1P20036 TUG1_2.1-201ENST00000614234 87 ntBASIC3.1□□□□□ -1.91
HLA-DPA1P20036 AC010133.1-201ENST00000615809 842 ntBASIC3.1□□□□□ -1.91
HLA-DPA1P20036 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DPA1P20036 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DPA1P20036 AC022336.2-201ENST00000568966 2538 ntBASIC3.1□□□□□ -1.91
HLA-DPA1P20036 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DPA1P20036 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
HLA-DPA1P20036 AC138915.1-201ENST00000565427 1685 ntBASIC3.09□□□□□ -1.91
HLA-DPA1P20036 RNU6-223P-201ENST00000362830 107 ntBASIC3.09□□□□□ -1.91
HLA-DPA1P20036 RNA5SP374-201ENST00000362939 125 ntBASIC3.09□□□□□ -1.91
HLA-DPA1P20036 RNU6-906P-201ENST00000384700 70 ntBASIC3.09□□□□□ -1.91
HLA-DPA1P20036 AL109755.1-201ENST00000401791 649 ntBASIC3.09□□□□□ -1.91
HLA-DPA1P20036 RNA5SP274-201ENST00000410484 108 ntBASIC3.09□□□□□ -1.91
HLA-DPA1P20036 RNU6-193P-201ENST00000410977 107 ntBASIC3.09□□□□□ -1.91
HLA-DPA1P20036 MTCO1P17-201ENST00000411522 491 ntBASIC3.09□□□□□ -1.91
HLA-DPA1P20036 UBE2FP1-201ENST00000416536 447 ntBASIC3.09□□□□□ -1.91
HLA-DPA1P20036 AL513477.1-202ENST00000417061 214 ntBASIC3.09□□□□□ -1.91
HLA-DPA1P20036 MTCO2P23-201ENST00000425216 680 ntBASIC3.09□□□□□ -1.91
HLA-DPA1P20036 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DPA1P20036 UQCRHP3-201ENST00000451503 251 ntBASIC3.09□□□□□ -1.91
HLA-DPA1P20036 USP9YP25-201ENST00000457708 443 ntBASIC3.09□□□□□ -1.91
HLA-DPA1P20036 RPS3AP43-201ENST00000479743 781 ntBASIC3.09□□□□□ -1.91
HLA-DPA1P20036 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DPA1P20036 AC138853.1-201ENST00000503549 823 ntBASIC3.09□□□□□ -1.91
HLA-DPA1P20036 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DPA1P20036 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DPA1P20036 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DPA1P20036 RNA5SP216-201ENST00000516111 123 ntBASIC3.09□□□□□ -1.91
HLA-DPA1P20036 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DPA1P20036 AC010653.1-201ENST00000571108 881 ntBASIC3.09□□□□□ -1.91
HLA-DPA1P20036 MIR3200-201ENST00000580767 85 ntBASIC3.09□□□□□ -1.91
HLA-DPA1P20036 AF038458.1-201ENST00000588406 262 ntBASIC3.09□□□□□ -1.91
HLA-DPA1P20036 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DPA1P20036 UCA1.1-201ENST00000620952 75 ntBASIC3.09□□□□□ -1.91
HLA-DPA1P20036 MIR8057-201ENST00000620957 69 ntBASIC3.09□□□□□ -1.91
HLA-DPA1P20036 AC026422.1-201ENST00000623961 452 ntBASIC3.09□□□□□ -1.91
HLA-DPA1P20036 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.09□□□□□ -1.91
HLA-DPA1P20036 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
HLA-DPA1P20036 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DPA1P20036 AC009902.3-201ENST00000606235 2172 ntBASIC3.08□□□□□ -1.92
HLA-DPA1P20036 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
HLA-DPA1P20036 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DPA1P20036 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DPA1P20036 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.08□□□□□ -1.92
HLA-DPA1P20036 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
HLA-DPA1P20036 MIR148B-201ENST00000362252 99 ntBASIC3.08□□□□□ -1.92
HLA-DPA1P20036 RNU6-462P-201ENST00000362659 105 ntBASIC3.08□□□□□ -1.92
HLA-DPA1P20036 RNU6-217P-201ENST00000384164 104 ntBASIC3.08□□□□□ -1.92
HLA-DPA1P20036 SNORD67-201ENST00000390833 111 ntBASIC3.08□□□□□ -1.92
HLA-DPA1P20036 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms