Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC112206.3-201ENST00000514578 389 ntBASIC5.36□□□□□ -1.55
ERCC3P19447 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.36□□□□□ -1.55
ERCC3P19447 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.36□□□□□ -1.55
ERCC3P19447 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.36□□□□□ -1.55
ERCC3P19447 AC026464.5-201ENST00000562497 722 ntBASIC5.36□□□□□ -1.55
ERCC3P19447 CYCSP40-201ENST00000575927 294 ntBASIC5.36□□□□□ -1.55
ERCC3P19447 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.36□□□□□ -1.55
ERCC3P19447 AC007687.1-201ENST00000602704 304 ntBASIC5.36□□□□□ -1.55
ERCC3P19447 DUSP12P1-201ENST00000612874 516 ntBASIC5.36□□□□□ -1.55
ERCC3P19447 TPTEP1-208ENST00000636884 213 ntBASIC5.36□□□□□ -1.55
ERCC3P19447 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
ERCC3P19447 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
ERCC3P19447 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ERCC3P19447 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
ERCC3P19447 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ERCC3P19447 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ERCC3P19447 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
ERCC3P19447 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.35□□□□□ -1.55
ERCC3P19447 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
ERCC3P19447 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ERCC3P19447 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ERCC3P19447 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ERCC3P19447 AC021146.4-201ENST00000309229 279 ntBASIC5.35□□□□□ -1.55
ERCC3P19447 RNU6-1252P-201ENST00000363054 104 ntBASIC5.35□□□□□ -1.55
ERCC3P19447 SNORD70.1-201ENST00000391007 85 ntBASIC5.35□□□□□ -1.55
ERCC3P19447 RNU6-817P-201ENST00000391083 104 ntBASIC5.35□□□□□ -1.55
ERCC3P19447 AL513331.1-201ENST00000411908 397 ntBASIC5.35□□□□□ -1.55
ERCC3P19447 RPS12P24-201ENST00000412619 387 ntBASIC5.35□□□□□ -1.55
ERCC3P19447 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.35□□□□□ -1.55
ERCC3P19447 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.35□□□□□ -1.55
ERCC3P19447 AL645937.1-202ENST00000421799 937 ntBASIC5.35□□□□□ -1.55
ERCC3P19447 HMGB3P11-201ENST00000440127 604 ntBASIC5.35□□□□□ -1.55
ERCC3P19447 RPL23AP24-201ENST00000458203 385 ntBASIC5.35□□□□□ -1.55
ERCC3P19447 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.35□□□□□ -1.55
ERCC3P19447 AC078817.1-201ENST00000492623 435 ntBASIC5.35□□□□□ -1.55
ERCC3P19447 AC073073.1-201ENST00000493920 463 ntBASIC5.35□□□□□ -1.55
ERCC3P19447 AP001086.1-201ENST00000494882 321 ntBASIC5.35□□□□□ -1.55
ERCC3P19447 TBCAP3-201ENST00000512475 312 ntBASIC5.35□□□□□ -1.55
ERCC3P19447 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.35□□□□□ -1.55
ERCC3P19447 RNA5SP249-201ENST00000516127 99 ntBASIC5.35□□□□□ -1.55
ERCC3P19447 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.35□□□□□ -1.55
ERCC3P19447 RPL23AP53-201ENST00000521854 457 ntBASIC5.35□□□□□ -1.55
ERCC3P19447 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.35□□□□□ -1.55
ERCC3P19447 AC087477.6-201ENST00000559595 843 ntBASIC5.35□□□□□ -1.55
ERCC3P19447 RPL23AP87-202ENST00000573039 466 ntBASIC5.35□□□□□ -1.55
ERCC3P19447 MIR4742-201ENST00000581069 85 ntBASIC5.35□□□□□ -1.55
ERCC3P19447 MIR3939-201ENST00000582614 106 ntBASIC5.35□□□□□ -1.55
ERCC3P19447 MIR4795-201ENST00000584182 89 ntBASIC5.35□□□□□ -1.55
ERCC3P19447 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.35□□□□□ -1.55
ERCC3P19447 AC004825.2-201ENST00000616634 455 ntBASIC5.35□□□□□ -1.55
ERCC3P19447 AP005019.3-201ENST00000620418 560 ntBASIC5.35□□□□□ -1.55
ERCC3P19447 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.35□□□□□ -1.55
ERCC3P19447 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.35□□□□□ -1.55
ERCC3P19447 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.35□□□□□ -1.55
ERCC3P19447 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
ERCC3P19447 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.35□□□□□ -1.55
ERCC3P19447 AC103710.2-202ENST00000641454 2853 ntBASIC5.35□□□□□ -1.55
ERCC3P19447 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
ERCC3P19447 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
ERCC3P19447 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ERCC3P19447 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.34□□□□□ -1.55
ERCC3P19447 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ERCC3P19447 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.34□□□□□ -1.55
ERCC3P19447 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
ERCC3P19447 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ERCC3P19447 RNA5SP28-201ENST00000363841 119 ntBASIC5.34□□□□□ -1.55
ERCC3P19447 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.34□□□□□ -1.55
ERCC3P19447 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
ERCC3P19447 RNA5SP219-201ENST00000390940 113 ntBASIC5.34□□□□□ -1.55
ERCC3P19447 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.34□□□□□ -1.55
ERCC3P19447 MIR1193-201ENST00000408109 78 ntBASIC5.34□□□□□ -1.55
ERCC3P19447 AC007390.1-201ENST00000415722 356 ntBASIC5.34□□□□□ -1.55
ERCC3P19447 AL139095.3-201ENST00000419672 1203 ntBASIC5.34□□□□□ -1.55
ERCC3P19447 RPL7AP25-201ENST00000423357 805 ntBASIC5.34□□□□□ -1.55
ERCC3P19447 MTCO3P46-201ENST00000425787 232 ntBASIC5.34□□□□□ -1.55
ERCC3P19447 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.34□□□□□ -1.55
ERCC3P19447 RNU6-1208P-201ENST00000459588 107 ntBASIC5.34□□□□□ -1.55
ERCC3P19447 Y_RNA.654-201ENST00000497848 106 ntBASIC5.34□□□□□ -1.55
ERCC3P19447 AC078918.1-201ENST00000498515 228 ntBASIC5.34□□□□□ -1.55
ERCC3P19447 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.34□□□□□ -1.55
ERCC3P19447 SNORA31.8-201ENST00000516327 108 ntBASIC5.34□□□□□ -1.55
ERCC3P19447 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.34□□□□□ -1.55
ERCC3P19447 GLYCAM1-201ENST00000546596 285 ntBASIC5.34□□□□□ -1.55
ERCC3P19447 AC011611.1-201ENST00000552179 197 ntBASIC5.34□□□□□ -1.55
ERCC3P19447 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ERCC3P19447 SCOCP1-201ENST00000554676 349 ntBASIC5.34□□□□□ -1.55
ERCC3P19447 AL020997.2-201ENST00000602607 184 ntBASIC5.34□□□□□ -1.55
ERCC3P19447 AC087045.1-201ENST00000605856 382 ntBASIC5.34□□□□□ -1.55
ERCC3P19447 AC128687.2-201ENST00000609657 566 ntBASIC5.34□□□□□ -1.55
ERCC3P19447 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ERCC3P19447 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
ERCC3P19447 SDAD1P2-201ENST00000441308 2028 ntBASIC5.34□□□□□ -1.55
ERCC3P19447 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
ERCC3P19447 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
ERCC3P19447 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.34□□□□□ -1.56
ERCC3P19447 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
ERCC3P19447 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
ERCC3P19447 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.33□□□□□ -1.56
ERCC3P19447 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.33□□□□□ -1.56
ERCC3P19447 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms