Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 RNU6-1304P-201ENST00000411374 106 ntBASIC4.48□□□□□ -1.69
ATF4P18848 AL096701.2-201ENST00000416920 238 ntBASIC4.48□□□□□ -1.69
ATF4P18848 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ATF4P18848 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.48□□□□□ -1.69
ATF4P18848 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.48□□□□□ -1.69
ATF4P18848 AC098614.2-201ENST00000426040 255 ntBASIC4.48□□□□□ -1.69
ATF4P18848 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ATF4P18848 RPL7AP49-201ENST00000429522 581 ntBASIC4.48□□□□□ -1.69
ATF4P18848 AL591438.1-201ENST00000433508 581 ntBASIC4.48□□□□□ -1.69
ATF4P18848 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.48□□□□□ -1.69
ATF4P18848 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.48□□□□□ -1.69
ATF4P18848 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.48□□□□□ -1.69
ATF4P18848 FGF7P3-201ENST00000454645 303 ntBASIC4.48□□□□□ -1.69
ATF4P18848 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.48□□□□□ -1.69
ATF4P18848 NXT1P1-201ENST00000458481 316 ntBASIC4.48□□□□□ -1.69
ATF4P18848 RNU7-152P-201ENST00000458982 64 ntBASIC4.48□□□□□ -1.69
ATF4P18848 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.48□□□□□ -1.69
ATF4P18848 AC002456.2-201ENST00000509356 380 ntBASIC4.48□□□□□ -1.69
ATF4P18848 AC021146.3-201ENST00000511911 260 ntBASIC4.48□□□□□ -1.69
ATF4P18848 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.48□□□□□ -1.69
ATF4P18848 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.48□□□□□ -1.69
ATF4P18848 RNA5SP271-201ENST00000516700 88 ntBASIC4.48□□□□□ -1.69
ATF4P18848 Y_RNA.708-201ENST00000516950 96 ntBASIC4.48□□□□□ -1.69
ATF4P18848 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.48□□□□□ -1.69
ATF4P18848 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.48□□□□□ -1.69
ATF4P18848 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.48□□□□□ -1.69
ATF4P18848 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.48□□□□□ -1.69
ATF4P18848 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.48□□□□□ -1.69
ATF4P18848 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.48□□□□□ -1.69
ATF4P18848 RN7SL753P-201ENST00000581238 290 ntBASIC4.48□□□□□ -1.69
ATF4P18848 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.48□□□□□ -1.69
ATF4P18848 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.48□□□□□ -1.69
ATF4P18848 BNIP3P22-201ENST00000593399 556 ntBASIC4.48□□□□□ -1.69
ATF4P18848 ELOCP5-201ENST00000604924 333 ntBASIC4.48□□□□□ -1.69
ATF4P18848 AC007938.3-201ENST00000604965 623 ntBASIC4.48□□□□□ -1.69
ATF4P18848 FTX_3.1-201ENST00000610451 147 ntBASIC4.48□□□□□ -1.69
ATF4P18848 Y_RNA.812-201ENST00000610788 101 ntBASIC4.48□□□□□ -1.69
ATF4P18848 Y_RNA.784-201ENST00000613803 101 ntBASIC4.48□□□□□ -1.69
ATF4P18848 Y_RNA.787-201ENST00000616522 101 ntBASIC4.48□□□□□ -1.69
ATF4P18848 Y_RNA.780-201ENST00000617336 101 ntBASIC4.48□□□□□ -1.69
ATF4P18848 Y_RNA.801-201ENST00000619005 101 ntBASIC4.48□□□□□ -1.69
ATF4P18848 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.48□□□□□ -1.69
ATF4P18848 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.48□□□□□ -1.69
ATF4P18848 AC027309.3-201ENST00000623419 351 ntBASIC4.48□□□□□ -1.69
ATF4P18848 CR381572.2-201ENST00000624852 397 ntBASIC4.48□□□□□ -1.69
ATF4P18848 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
ATF4P18848 MTND5P10-201ENST00000603719 1809 ntBASIC4.48□□□□□ -1.69
ATF4P18848 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
ATF4P18848 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.48□□□□□ -1.69
ATF4P18848 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ATF4P18848 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.47□□□□□ -1.69
ATF4P18848 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
ATF4P18848 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
ATF4P18848 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.47□□□□□ -1.69
ATF4P18848 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ATF4P18848 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.47□□□□□ -1.69
ATF4P18848 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.47□□□□□ -1.69
ATF4P18848 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
ATF4P18848 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ATF4P18848 FTLP6-201ENST00000355274 422 ntBASIC4.47□□□□□ -1.69
ATF4P18848 Y_RNA.128-201ENST00000363391 112 ntBASIC4.47□□□□□ -1.69
ATF4P18848 AC005042.1-201ENST00000393397 800 ntBASIC4.47□□□□□ -1.69
ATF4P18848 PGBD4P6-201ENST00000421501 610 ntBASIC4.47□□□□□ -1.69
ATF4P18848 AC115283.1-201ENST00000427353 400 ntBASIC4.47□□□□□ -1.69
ATF4P18848 RPL19P16-201ENST00000433839 588 ntBASIC4.47□□□□□ -1.69
ATF4P18848 AL049745.1-201ENST00000433953 286 ntBASIC4.47□□□□□ -1.69
ATF4P18848 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.47□□□□□ -1.69
ATF4P18848 ARL2BPP10-201ENST00000446487 531 ntBASIC4.47□□□□□ -1.69
ATF4P18848 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ATF4P18848 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.47□□□□□ -1.69
ATF4P18848 AC092798.1-201ENST00000458542 409 ntBASIC4.47□□□□□ -1.69
ATF4P18848 RPL7P51-201ENST00000490532 749 ntBASIC4.47□□□□□ -1.69
ATF4P18848 RPS17P5-201ENST00000498293 408 ntBASIC4.47□□□□□ -1.69
ATF4P18848 AC005741.1-201ENST00000511094 432 ntBASIC4.47□□□□□ -1.69
ATF4P18848 RNA5SP309-201ENST00000516670 106 ntBASIC4.47□□□□□ -1.69
ATF4P18848 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.47□□□□□ -1.69
ATF4P18848 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.47□□□□□ -1.69
ATF4P18848 IGKV3D-34-201ENST00000522638 302 ntBASIC4.47□□□□□ -1.69
ATF4P18848 AC104576.1-201ENST00000524225 88 ntBASIC4.47□□□□□ -1.69
ATF4P18848 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.47□□□□□ -1.69
ATF4P18848 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.47□□□□□ -1.69
ATF4P18848 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.47□□□□□ -1.69
ATF4P18848 MIR4782-201ENST00000577987 79 ntBASIC4.47□□□□□ -1.69
ATF4P18848 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
ATF4P18848 AC078795.3-201ENST00000602913 472 ntBASIC4.47□□□□□ -1.69
ATF4P18848 AC009597.2-201ENST00000604659 592 ntBASIC4.47□□□□□ -1.69
ATF4P18848 AC124303.1-201ENST00000605703 360 ntBASIC4.47□□□□□ -1.69
ATF4P18848 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ATF4P18848 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.47□□□□□ -1.69
ATF4P18848 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ATF4P18848 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
ATF4P18848 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ATF4P18848 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
ATF4P18848 MAPK10-303ENST00000641324 3959 ntBASIC4.46□□□□□ -1.69
ATF4P18848 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
ATF4P18848 AL133383.2-201ENST00000622958 2336 ntBASIC4.46□□□□□ -1.69
ATF4P18848 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.46□□□□□ -1.69
ATF4P18848 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.69
ATF4P18848 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
ATF4P18848 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms