Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 MIR153-1-201ENST00000384914 90 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
COL6A2P12110 RNA5SP113-201ENST00000410486 84 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 RNU4-78P-201ENST00000410940 126 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 POLHP1-201ENST00000411806 470 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 RPL30P2-201ENST00000414021 291 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.51□□□□□ -1.69
COL6A2P12110 BX510359.2-201ENST00000417920 305 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 AC093106.2-201ENST00000428212 385 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.51□□□□□ -1.69
COL6A2P12110 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.51□□□□□ -1.69
COL6A2P12110 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.51□□□□□ -1.69
COL6A2P12110 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL6A2P12110 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL6A2P12110 CEACAMP6-201ENST00000452007 574 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL6A2P12110 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.51□□□□□ -1.69
COL6A2P12110 Y_RNA.635-201ENST00000459041 101 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 MTND4P17-201ENST00000470444 350 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.51□□□□□ -1.69
COL6A2P12110 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.51□□□□□ -1.69
COL6A2P12110 AC012181.1-201ENST00000479895 423 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 IGLV2-34-201ENST00000490007 283 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 RPL23AP55-201ENST00000498163 452 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL6A2P12110 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.51□□□□□ -1.69
COL6A2P12110 VWA8P1-201ENST00000510889 176 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 AC015795.1-201ENST00000513669 327 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 RNU6-559P-201ENST00000516151 98 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 Y_RNA.718-201ENST00000517110 102 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.51□□□□□ -1.69
COL6A2P12110 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.51□□□□□ -1.69
COL6A2P12110 AC093012.1-202ENST00000549403 582 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.51□□□□□ -1.69
COL6A2P12110 MTND6P33-201ENST00000571794 183 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.51□□□□□ -1.69
COL6A2P12110 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.51□□□□□ -1.69
COL6A2P12110 AC010201.1-201ENST00000605051 540 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 AL162730.1-201ENST00000605734 292 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.51□□□□□ -1.69
COL6A2P12110 AC103705.1-201ENST00000619013 241 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 RMST_9.1-201ENST00000619945 193 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 AC007998.5-201ENST00000622938 237 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.51□□□□□ -1.69
COL6A2P12110 U3.53-201ENST00000628922 216 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
COL6A2P12110 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
COL6A2P12110 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL6A2P12110 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.51□□□□□ -1.69
COL6A2P12110 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL6A2P12110 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.51□□□□□ -1.69
COL6A2P12110 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL6A2P12110 MTND4P27-201ENST00000450813 1354 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 A2MP1-204ENST00000566278 4130 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 MTND5P3-201ENST00000438536 1800 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.5□□□□□ -1.69
COL6A2P12110 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.5□□□□□ -1.69
COL6A2P12110 ZNF137P-201ENST00000456718 1920 ntBASIC4.5□□□□□ -1.69
COL6A2P12110 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL6A2P12110 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL6A2P12110 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL6A2P12110 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.5□□□□□ -1.69
COL6A2P12110 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL6A2P12110 RNU6-1249P-201ENST00000363237 111 ntBASIC4.5□□□□□ -1.69
COL6A2P12110 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL6A2P12110 RNU1-63P-201ENST00000383902 164 ntBASIC4.5□□□□□ -1.69
COL6A2P12110 Y_RNA.579-201ENST00000390939 94 ntBASIC4.5□□□□□ -1.69
COL6A2P12110 RNU6-837P-201ENST00000391056 108 ntBASIC4.5□□□□□ -1.69
COL6A2P12110 EIF4E2P1-201ENST00000393781 255 ntBASIC4.5□□□□□ -1.69
COL6A2P12110 RPS23P10-201ENST00000416185 486 ntBASIC4.5□□□□□ -1.69
COL6A2P12110 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.5□□□□□ -1.69
COL6A2P12110 AC090774.1-201ENST00000435925 246 ntBASIC4.5□□□□□ -1.69
COL6A2P12110 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.5□□□□□ -1.69
COL6A2P12110 FGF7P3-201ENST00000454645 303 ntBASIC4.5□□□□□ -1.69
COL6A2P12110 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.5□□□□□ -1.69
COL6A2P12110 AC116533.1-201ENST00000459748 321 ntBASIC4.5□□□□□ -1.69
COL6A2P12110 AC004801.2-202ENST00000463559 283 ntBASIC4.5□□□□□ -1.69
COL6A2P12110 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.5□□□□□ -1.69
COL6A2P12110 AC007686.1-201ENST00000488511 463 ntBASIC4.5□□□□□ -1.69
COL6A2P12110 MTND5P5-201ENST00000503764 376 ntBASIC4.5□□□□□ -1.69
COL6A2P12110 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.5□□□□□ -1.69
COL6A2P12110 AC007016.1-201ENST00000512110 244 ntBASIC4.5□□□□□ -1.69
COL6A2P12110 Y_RNA.682-201ENST00000516457 100 ntBASIC4.5□□□□□ -1.69
COL6A2P12110 RNU6-1088P-201ENST00000516850 104 ntBASIC4.5□□□□□ -1.69
COL6A2P12110 TRMT10BP1-201ENST00000519377 943 ntBASIC4.5□□□□□ -1.69
COL6A2P12110 HIGD1AP5-201ENST00000529959 259 ntBASIC4.5□□□□□ -1.69
COL6A2P12110 RANP3-201ENST00000530970 276 ntBASIC4.5□□□□□ -1.69
COL6A2P12110 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.5□□□□□ -1.69
COL6A2P12110 AP001880.2-201ENST00000538233 448 ntBASIC4.5□□□□□ -1.69
COL6A2P12110 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.5□□□□□ -1.69
COL6A2P12110 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.5□□□□□ -1.69
COL6A2P12110 MIR4646-201ENST00000580775 63 ntBASIC4.5□□□□□ -1.69
COL6A2P12110 Mico1.1-201ENST00000611698 204 ntBASIC4.5□□□□□ -1.69
COL6A2P12110 AC004696.1-201ENST00000614345 607 ntBASIC4.5□□□□□ -1.69
COL6A2P12110 AL450472.3-201ENST00000615578 367 ntBASIC4.5□□□□□ -1.69
COL6A2P12110 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.5□□□□□ -1.69
COL6A2P12110 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL6A2P12110 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.5□□□□□ -1.69
COL6A2P12110 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 157.1 ms