Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
TPM1P09493 AL139109.1-201ENST00000455491 297 ntBASIC2.54□□□□□ -2
TPM1P09493 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC2.54□□□□□ -2
TPM1P09493 KLRA1P-201ENST00000503499 986 ntBASIC2.54□□□□□ -2
TPM1P09493 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.54□□□□□ -2
TPM1P09493 AC024220.1-201ENST00000603675 484 ntBASIC2.54□□□□□ -2
TPM1P09493 OR2AS2P-201ENST00000606902 342 ntBASIC2.54□□□□□ -2
TPM1P09493 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.54□□□□□ -2
TPM1P09493 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.54□□□□□ -2
TPM1P09493 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
TPM1P09493 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
TPM1P09493 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.53□□□□□ -2
TPM1P09493 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.53□□□□□ -2
TPM1P09493 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.53□□□□□ -2
TPM1P09493 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
TPM1P09493 AC007785.2-201ENST00000598627 1916 ntBASIC2.53□□□□□ -2
TPM1P09493 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.53□□□□□ -2
TPM1P09493 RNU6-481P-201ENST00000384194 107 ntBASIC2.53□□□□□ -2
TPM1P09493 MIR196B-201ENST00000384852 84 ntBASIC2.53□□□□□ -2
TPM1P09493 RNA5SP171-201ENST00000391071 115 ntBASIC2.53□□□□□ -2
TPM1P09493 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.53□□□□□ -2
TPM1P09493 BOLA3P4-201ENST00000418151 400 ntBASIC2.53□□□□□ -2
TPM1P09493 SEPT2P1-201ENST00000419651 180 ntBASIC2.53□□□□□ -2
TPM1P09493 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.53□□□□□ -2
TPM1P09493 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.53□□□□□ -2
TPM1P09493 CYCSP32-201ENST00000440548 321 ntBASIC2.53□□□□□ -2
TPM1P09493 PGBD4P3-201ENST00000440731 581 ntBASIC2.53□□□□□ -2
TPM1P09493 AC013828.1-201ENST00000481845 158 ntBASIC2.53□□□□□ -2
TPM1P09493 SCARNA15.2-201ENST00000516409 127 ntBASIC2.53□□□□□ -2
TPM1P09493 SNORA48.10-201ENST00000516965 160 ntBASIC2.53□□□□□ -2
TPM1P09493 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.53□□□□□ -2
TPM1P09493 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.53□□□□□ -2
TPM1P09493 AP002748.2-201ENST00000528671 348 ntBASIC2.53□□□□□ -2
TPM1P09493 AC021269.2-201ENST00000532318 330 ntBASIC2.53□□□□□ -2
TPM1P09493 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.53□□□□□ -2
TPM1P09493 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.53□□□□□ -2
TPM1P09493 AC124947.2-202ENST00000552735 133 ntBASIC2.53□□□□□ -2
TPM1P09493 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.53□□□□□ -2
TPM1P09493 GTF2IP8-201ENST00000560687 584 ntBASIC2.53□□□□□ -2
TPM1P09493 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.53□□□□□ -2
TPM1P09493 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.53□□□□□ -2
TPM1P09493 VN1R90P-201ENST00000595717 726 ntBASIC2.53□□□□□ -2
TPM1P09493 OR10AB1P-201ENST00000609613 938 ntBASIC2.53□□□□□ -2
TPM1P09493 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.53□□□□□ -2
TPM1P09493 AC004777.1-201ENST00000624317 287 ntBASIC2.53□□□□□ -2
TPM1P09493 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.53□□□□□ -2
TPM1P09493 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TPM1P09493 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
TPM1P09493 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
TPM1P09493 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TPM1P09493 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TPM1P09493 RNU4-52P-201ENST00000384209 138 ntBASIC2.52□□□□□ -2.01
TPM1P09493 AL591416.1-201ENST00000404015 867 ntBASIC2.52□□□□□ -2.01
TPM1P09493 AL356131.1-201ENST00000405826 414 ntBASIC2.52□□□□□ -2.01
TPM1P09493 RNU4-72P-201ENST00000410754 173 ntBASIC2.52□□□□□ -2.01
TPM1P09493 AL513331.1-201ENST00000411908 397 ntBASIC2.52□□□□□ -2.01
TPM1P09493 MTCO3P1-205ENST00000422088 832 ntBASIC2.52□□□□□ -2.01
TPM1P09493 AC107083.1-201ENST00000439643 279 ntBASIC2.52□□□□□ -2.01
TPM1P09493 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.52□□□□□ -2.01
TPM1P09493 SUMO2P2-201ENST00000456482 255 ntBASIC2.52□□□□□ -2.01
TPM1P09493 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.52□□□□□ -2.01
TPM1P09493 AC091860.1-201ENST00000505723 432 ntBASIC2.52□□□□□ -2.01
TPM1P09493 RN7SKP132-201ENST00000516001 208 ntBASIC2.52□□□□□ -2.01
TPM1P09493 SNORA31.22-201ENST00000517204 135 ntBASIC2.52□□□□□ -2.01
TPM1P09493 AC022634.1-201ENST00000520765 532 ntBASIC2.52□□□□□ -2.01
TPM1P09493 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.52□□□□□ -2.01
TPM1P09493 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.52□□□□□ -2.01
TPM1P09493 AC024224.1-201ENST00000538284 609 ntBASIC2.52□□□□□ -2.01
TPM1P09493 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
TPM1P09493 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.52□□□□□ -2.01
TPM1P09493 GTF3AP2-201ENST00000557014 266 ntBASIC2.52□□□□□ -2.01
TPM1P09493 AC087465.1-201ENST00000560574 245 ntBASIC2.52□□□□□ -2.01
TPM1P09493 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.52□□□□□ -2.01
TPM1P09493 AC009127.3-201ENST00000570531 403 ntBASIC2.52□□□□□ -2.01
TPM1P09493 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.52□□□□□ -2.01
TPM1P09493 AP001542.1-201ENST00000591314 200 ntBASIC2.52□□□□□ -2.01
TPM1P09493 BNIP3P24-201ENST00000593398 557 ntBASIC2.52□□□□□ -2.01
TPM1P09493 RPS15AP11-201ENST00000594193 385 ntBASIC2.52□□□□□ -2.01
TPM1P09493 OR4H6P-202ENST00000603819 340 ntBASIC2.52□□□□□ -2.01
TPM1P09493 DUXAP11-201ENST00000603858 526 ntBASIC2.52□□□□□ -2.01
TPM1P09493 AC007621.1-201ENST00000604544 437 ntBASIC2.52□□□□□ -2.01
TPM1P09493 AC092954.1-201ENST00000609121 445 ntBASIC2.52□□□□□ -2.01
TPM1P09493 AL445493.3-201ENST00000619568 477 ntBASIC2.52□□□□□ -2.01
TPM1P09493 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.52□□□□□ -2.01
TPM1P09493 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
TPM1P09493 MTND4P1-201ENST00000457501 1466 ntBASIC2.52□□□□□ -2.01
TPM1P09493 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.51□□□□□ -2.01
TPM1P09493 SNORA38-201ENST00000363946 132 ntBASIC2.51□□□□□ -2.01
TPM1P09493 RNU6-353P-201ENST00000364266 108 ntBASIC2.51□□□□□ -2.01
TPM1P09493 MIR514A1-201ENST00000385133 98 ntBASIC2.51□□□□□ -2.01
TPM1P09493 HMGB3P2-201ENST00000411913 584 ntBASIC2.51□□□□□ -2.01
TPM1P09493 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.51□□□□□ -2.01
TPM1P09493 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.51□□□□□ -2.01
TPM1P09493 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.51□□□□□ -2.01
TPM1P09493 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.51□□□□□ -2.01
TPM1P09493 RPS15AP28-201ENST00000435088 386 ntBASIC2.51□□□□□ -2.01
TPM1P09493 AL353691.1-201ENST00000451332 387 ntBASIC2.51□□□□□ -2.01
TPM1P09493 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.51□□□□□ -2.01
TPM1P09493 RNU6-775P-201ENST00000459318 96 ntBASIC2.51□□□□□ -2.01
TPM1P09493 GZMAP1-201ENST00000503054 631 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms