Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC025016.1-201ENST00000616746 682 ntBASIC1.89□□□□□ -2.11
COL4A1P02462 MIR6779-201ENST00000617283 64 ntBASIC1.89□□□□□ -2.11
COL4A1P02462 AC090617.7-201ENST00000623952 126 ntBASIC1.89□□□□□ -2.11
COL4A1P02462 AC096656.1-201ENST00000623826 1364 ntBASIC1.88□□□□□ -2.11
COL4A1P02462 RNU6-650P-201ENST00000365658 111 ntBASIC1.88□□□□□ -2.11
COL4A1P02462 RNU4-74P-201ENST00000411280 161 ntBASIC1.88□□□□□ -2.11
COL4A1P02462 HMGN2P19-201ENST00000425149 265 ntBASIC1.88□□□□□ -2.11
COL4A1P02462 AC114878.1-201ENST00000441166 358 ntBASIC1.88□□□□□ -2.11
COL4A1P02462 AL513343.1-201ENST00000451818 792 ntBASIC1.88□□□□□ -2.11
COL4A1P02462 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.88□□□□□ -2.11
COL4A1P02462 OR9N1P-202ENST00000494289 481 ntBASIC1.88□□□□□ -2.11
COL4A1P02462 RPL23AP55-201ENST00000498163 452 ntBASIC1.88□□□□□ -2.11
COL4A1P02462 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.88□□□□□ -2.11
COL4A1P02462 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.88□□□□□ -2.11
COL4A1P02462 MIR3618-201ENST00000580330 88 ntBASIC1.88□□□□□ -2.11
COL4A1P02462 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.88□□□□□ -2.11
COL4A1P02462 PCNAP1-202ENST00000595299 752 ntBASIC1.88□□□□□ -2.11
COL4A1P02462 AL450270.1-201ENST00000606160 391 ntBASIC1.88□□□□□ -2.11
COL4A1P02462 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
COL4A1P02462 MTND4P21-201ENST00000453886 1357 ntBASIC1.88□□□□□ -2.11
COL4A1P02462 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
COL4A1P02462 MTND4P31-201ENST00000425607 1343 ntBASIC1.88□□□□□ -2.11
COL4A1P02462 HSPE1P11-201ENST00000339579 310 ntBASIC1.87□□□□□ -2.11
COL4A1P02462 RNA5SP325-201ENST00000363756 130 ntBASIC1.87□□□□□ -2.11
COL4A1P02462 RNU6-452P-201ENST00000384406 107 ntBASIC1.87□□□□□ -2.11
COL4A1P02462 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
COL4A1P02462 RPL23AP47-201ENST00000408017 460 ntBASIC1.87□□□□□ -2.11
COL4A1P02462 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.87□□□□□ -2.11
COL4A1P02462 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.87□□□□□ -2.11
COL4A1P02462 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC1.87□□□□□ -2.11
COL4A1P02462 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.87□□□□□ -2.11
COL4A1P02462 PPP1R2P5-201ENST00000457256 603 ntBASIC1.87□□□□□ -2.11
COL4A1P02462 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC1.87□□□□□ -2.11
COL4A1P02462 AC133963.2-201ENST00000513686 578 ntBASIC1.87□□□□□ -2.11
COL4A1P02462 RNU6-56P-201ENST00000516986 93 ntBASIC1.87□□□□□ -2.11
COL4A1P02462 OR6C73P-201ENST00000546432 358 ntBASIC1.87□□□□□ -2.11
COL4A1P02462 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.87□□□□□ -2.11
COL4A1P02462 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
COL4A1P02462 AC008687.2-201ENST00000597865 520 ntBASIC1.87□□□□□ -2.11
COL4A1P02462 AL021368.1-201ENST00000607490 540 ntBASIC1.87□□□□□ -2.11
COL4A1P02462 AL512598.1-201ENST00000610158 273 ntBASIC1.87□□□□□ -2.11
COL4A1P02462 AC139769.3-201ENST00000618383 175 ntBASIC1.87□□□□□ -2.11
COL4A1P02462 AL121594.5-201ENST00000631724 573 ntBASIC1.87□□□□□ -2.11
COL4A1P02462 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.87□□□□□ -2.11
COL4A1P02462 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
COL4A1P02462 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.87□□□□□ -2.11
COL4A1P02462 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.86□□□□□ -2.11
COL4A1P02462 RNU6-98P-201ENST00000384173 107 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 HMGB1P10-201ENST00000395823 563 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 MORF4L1P7-201ENST00000426038 703 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC1.86□□□□□ -2.11
COL4A1P02462 AC009238.1-201ENST00000442165 424 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 ARL5AP2-201ENST00000444698 533 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 AC009237.6-201ENST00000446969 424 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 AC092685.1-201ENST00000447960 1243 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 HMGB1P26-201ENST00000452520 628 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 NOP56P3-201ENST00000549457 385 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 AP005136.1-201ENST00000579765 429 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 AC098848.2-201ENST00000588023 330 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.86□□□□□ -2.11
COL4A1P02462 AC040174.2-201ENST00000602701 465 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 AC011374.2-201ENST00000607135 526 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 AC006023.2-201ENST00000609916 167 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 AC024595.1-201ENST00000623088 387 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 AC090617.9-201ENST00000623751 147 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
COL4A1P02462 RNU6-252P-201ENST00000363232 107 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 Y_RNA.112-201ENST00000363250 102 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 MIR1303-201ENST00000408625 86 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 AC092745.2-202ENST00000411880 369 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.86□□□□□ -2.11
COL4A1P02462 MTND4LP14-201ENST00000429447 288 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.86□□□□□ -2.11
COL4A1P02462 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.86□□□□□ -2.11
COL4A1P02462 GTF2IP7-202ENST00000436677 309 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.86□□□□□ -2.11
COL4A1P02462 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.86□□□□□ -2.11
COL4A1P02462 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.86□□□□□ -2.11
COL4A1P02462 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.86□□□□□ -2.11
COL4A1P02462 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
COL4A1P02462 AC008494.2-201ENST00000514544 370 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC1.86□□□□□ -2.11
COL4A1P02462 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
COL4A1P02462 HSPE1P20-201ENST00000538133 289 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.86□□□□□ -2.11
COL4A1P02462 OR4K8P-201ENST00000578842 1048 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.86□□□□□ -2.11
COL4A1P02462 AP001180.3-201ENST00000582221 145 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 CBX3P2-202ENST00000583365 535 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 AC018618.2-201ENST00000604770 446 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC1.86□□□□□ -2.11
COL4A1P02462 AC083865.1-201ENST00000636634 831 ntBASIC1.86□□□□□ -2.11
COL4A1P02462 AL391987.6-201ENST00000305671 199 ntBASIC1.85□□□□□ -2.11
COL4A1P02462 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.85□□□□□ -2.11
COL4A1P02462 VTRNA1-1-201ENST00000363120 99 ntBASIC1.85□□□□□ -2.11
COL4A1P02462 RNU2-71P-201ENST00000411395 189 ntBASIC1.85□□□□□ -2.11
COL4A1P02462 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.85□□□□□ -2.11
COL4A1P02462 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.85□□□□□ -2.11
COL4A1P02462 DNAJC19P4-201ENST00000440115 345 ntBASIC1.85□□□□□ -2.11
COL4A1P02462 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms