Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AL590762.3-201ENST00000436372 640 ntBASIC2.05□□□□□ -2.08
COL1A1P02452 UBBP3-201ENST00000445497 241 ntBASIC2.05□□□□□ -2.08
COL1A1P02452 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.05□□□□□ -2.08
COL1A1P02452 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.05□□□□□ -2.08
COL1A1P02452 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
COL1A1P02452 SNORD116-30-201ENST00000516468 85 ntBASIC2.05□□□□□ -2.08
COL1A1P02452 ERHP1-201ENST00000523006 310 ntBASIC2.05□□□□□ -2.08
COL1A1P02452 AC103987.3-201ENST00000582071 292 ntBASIC2.05□□□□□ -2.08
COL1A1P02452 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC2.05□□□□□ -2.08
COL1A1P02452 AC024560.3-201ENST00000608482 349 ntBASIC2.05□□□□□ -2.08
COL1A1P02452 AL512598.1-201ENST00000610158 273 ntBASIC2.05□□□□□ -2.08
COL1A1P02452 AC008083.4-201ENST00000615076 444 ntBASIC2.05□□□□□ -2.08
COL1A1P02452 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.05□□□□□ -2.08
COL1A1P02452 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.05□□□□□ -2.08
COL1A1P02452 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.05□□□□□ -2.08
COL1A1P02452 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL1A1P02452 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL1A1P02452 RNA5SP27-201ENST00000363839 119 ntBASIC2.04□□□□□ -2.08
COL1A1P02452 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL1A1P02452 MIR1323-201ENST00000408090 73 ntBASIC2.04□□□□□ -2.08
COL1A1P02452 LSM1P1-201ENST00000438629 273 ntBASIC2.04□□□□□ -2.08
COL1A1P02452 TPTE2P6-202ENST00000445572 1007 ntBASIC2.04□□□□□ -2.08
COL1A1P02452 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.04□□□□□ -2.08
COL1A1P02452 SSXP1-201ENST00000453640 473 ntBASIC2.04□□□□□ -2.08
COL1A1P02452 AC080013.2-201ENST00000460866 323 ntBASIC2.04□□□□□ -2.08
COL1A1P02452 AC010285.1-201ENST00000470580 392 ntBASIC2.04□□□□□ -2.08
COL1A1P02452 SEM1P1-201ENST00000506694 209 ntBASIC2.04□□□□□ -2.08
COL1A1P02452 AC004062.1-201ENST00000509926 645 ntBASIC2.04□□□□□ -2.08
COL1A1P02452 AC109471.1-201ENST00000511631 612 ntBASIC2.04□□□□□ -2.08
COL1A1P02452 AC133963.2-201ENST00000513686 578 ntBASIC2.04□□□□□ -2.08
COL1A1P02452 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.04□□□□□ -2.08
COL1A1P02452 IGLV3-17-201ENST00000519099 244 ntBASIC2.04□□□□□ -2.08
COL1A1P02452 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.04□□□□□ -2.08
COL1A1P02452 NBEAP1-201ENST00000554452 979 ntBASIC2.04□□□□□ -2.08
COL1A1P02452 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.04□□□□□ -2.08
COL1A1P02452 AC104581.2-201ENST00000572227 430 ntBASIC2.04□□□□□ -2.08
COL1A1P02452 AC013444.2-201ENST00000603317 787 ntBASIC2.04□□□□□ -2.08
COL1A1P02452 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.04□□□□□ -2.08
COL1A1P02452 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
COL1A1P02452 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
COL1A1P02452 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL1A1P02452 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
COL1A1P02452 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.04□□□□□ -2.08
COL1A1P02452 RNA5SP489-201ENST00000410986 109 ntBASIC2.03□□□□□ -2.08
COL1A1P02452 MTCO3P4-201ENST00000419236 787 ntBASIC2.03□□□□□ -2.08
COL1A1P02452 FO393414.1-201ENST00000428697 1184 ntBASIC2.03□□□□□ -2.08
COL1A1P02452 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.03□□□□□ -2.08
COL1A1P02452 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.03□□□□□ -2.08
COL1A1P02452 AC069528.1-202ENST00000482888 637 ntBASIC2.03□□□□□ -2.08
COL1A1P02452 RAC1P5-201ENST00000512182 576 ntBASIC2.03□□□□□ -2.08
COL1A1P02452 AC025755.1-201ENST00000521306 278 ntBASIC2.03□□□□□ -2.08
COL1A1P02452 CIR1P1-201ENST00000524055 1133 ntBASIC2.03□□□□□ -2.08
COL1A1P02452 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.03□□□□□ -2.08
COL1A1P02452 MIR3199-1-201ENST00000582434 88 ntBASIC2.03□□□□□ -2.08
COL1A1P02452 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.03□□□□□ -2.08
COL1A1P02452 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
COL1A1P02452 U6.48-201ENST00000618523 106 ntBASIC2.03□□□□□ -2.08
COL1A1P02452 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
COL1A1P02452 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.03□□□□□ -2.08
COL1A1P02452 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC2.03□□□□□ -2.08
COL1A1P02452 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
COL1A1P02452 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
COL1A1P02452 RNU6-392P-201ENST00000364926 101 ntBASIC2.02□□□□□ -2.09
COL1A1P02452 RNU6-1180P-201ENST00000364935 107 ntBASIC2.02□□□□□ -2.09
COL1A1P02452 Y_RNA.374-201ENST00000365606 101 ntBASIC2.02□□□□□ -2.09
COL1A1P02452 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.02□□□□□ -2.09
COL1A1P02452 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.02□□□□□ -2.09
COL1A1P02452 HMGN2P30-201ENST00000423237 256 ntBASIC2.02□□□□□ -2.09
COL1A1P02452 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.02□□□□□ -2.09
COL1A1P02452 HMGB1P31-201ENST00000437242 427 ntBASIC2.02□□□□□ -2.09
COL1A1P02452 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.02□□□□□ -2.09
COL1A1P02452 RPL12P25-201ENST00000455592 494 ntBASIC2.02□□□□□ -2.09
COL1A1P02452 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.02□□□□□ -2.09
COL1A1P02452 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
COL1A1P02452 AIG1P1-201ENST00000503376 148 ntBASIC2.02□□□□□ -2.09
COL1A1P02452 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.02□□□□□ -2.09
COL1A1P02452 AC105914.1-201ENST00000511798 226 ntBASIC2.02□□□□□ -2.09
COL1A1P02452 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.02□□□□□ -2.09
COL1A1P02452 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.02□□□□□ -2.09
COL1A1P02452 AC107954.1-201ENST00000565906 727 ntBASIC2.02□□□□□ -2.09
COL1A1P02452 AC106791.2-201ENST00000604680 391 ntBASIC2.02□□□□□ -2.09
COL1A1P02452 AL133507.1-201ENST00000605269 557 ntBASIC2.02□□□□□ -2.09
COL1A1P02452 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.02□□□□□ -2.09
COL1A1P02452 AC138915.1-201ENST00000565427 1685 ntBASIC2.02□□□□□ -2.09
COL1A1P02452 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
COL1A1P02452 Y_RNA.191-201ENST00000363972 113 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 AL606495.1-201ENST00000422100 813 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 RPS15AP7-201ENST00000439294 405 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.01□□□□□ -2.09
COL1A1P02452 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.01□□□□□ -2.09
COL1A1P02452 BX322784.1-201ENST00000455793 1077 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.01□□□□□ -2.09
COL1A1P02452 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.01□□□□□ -2.09
COL1A1P02452 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.01□□□□□ -2.09
COL1A1P02452 OR4P1P-201ENST00000530808 1136 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.01□□□□□ -2.09
COL1A1P02452 AC125611.2-201ENST00000551907 647 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 POLR2KP1-201ENST00000553226 168 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 AL049870.4-201ENST00000555741 486 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms