Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 MTND4P16-201ENST00000466108 1367 ntBASIC3.88□□□□□ -1.79
DDX58O95786 ZNF807-201ENST00000328088 1707 ntBASIC3.87□□□□□ -1.79
DDX58O95786 AC002546.1-201ENST00000588041 2504 ntBASIC3.87□□□□□ -1.79
DDX58O95786 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
DDX58O95786 RNU6-433P-201ENST00000363216 104 ntBASIC3.87□□□□□ -1.79
DDX58O95786 Y_RNA.169-201ENST00000363745 96 ntBASIC3.87□□□□□ -1.79
DDX58O95786 SNORA44-201ENST00000384584 132 ntBASIC3.87□□□□□ -1.79
DDX58O95786 U3.20-201ENST00000390909 217 ntBASIC3.87□□□□□ -1.79
DDX58O95786 FAT1P1-201ENST00000406588 507 ntBASIC3.87□□□□□ -1.79
DDX58O95786 RNU6-516P-201ENST00000411381 104 ntBASIC3.87□□□□□ -1.79
DDX58O95786 AC109780.2-201ENST00000413467 845 ntBASIC3.87□□□□□ -1.79
DDX58O95786 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.87□□□□□ -1.79
DDX58O95786 RPS12P18-201ENST00000442381 270 ntBASIC3.87□□□□□ -1.79
DDX58O95786 AP000542.1-201ENST00000448473 371 ntBASIC3.87□□□□□ -1.79
DDX58O95786 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.87□□□□□ -1.79
DDX58O95786 ART2BP-201ENST00000453501 499 ntBASIC3.87□□□□□ -1.79
DDX58O95786 AC010486.2-201ENST00000505572 483 ntBASIC3.87□□□□□ -1.79
DDX58O95786 AC022447.3-201ENST00000506865 495 ntBASIC3.87□□□□□ -1.79
DDX58O95786 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.87□□□□□ -1.79
DDX58O95786 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.87□□□□□ -1.79
DDX58O95786 RNU1-143P-201ENST00000516296 146 ntBASIC3.87□□□□□ -1.79
DDX58O95786 FAM60DP-201ENST00000524174 632 ntBASIC3.87□□□□□ -1.79
DDX58O95786 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
DDX58O95786 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.87□□□□□ -1.79
DDX58O95786 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
DDX58O95786 AC007954.1-201ENST00000554198 494 ntBASIC3.87□□□□□ -1.79
DDX58O95786 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.87□□□□□ -1.79
DDX58O95786 AC136618.2-201ENST00000575091 400 ntBASIC3.87□□□□□ -1.79
DDX58O95786 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.87□□□□□ -1.79
DDX58O95786 AC008962.1-201ENST00000605729 304 ntBASIC3.87□□□□□ -1.79
DDX58O95786 U1.23-201ENST00000610293 146 ntBASIC3.87□□□□□ -1.79
DDX58O95786 RNU1-68P-201ENST00000615382 146 ntBASIC3.87□□□□□ -1.79
DDX58O95786 AC002076.2-201ENST00000617362 122 ntBASIC3.87□□□□□ -1.79
DDX58O95786 U1.39-201ENST00000621562 146 ntBASIC3.87□□□□□ -1.79
DDX58O95786 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
DDX58O95786 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
DDX58O95786 AC093010.3-201ENST00000570269 15214 ntBASIC3.86□□□□□ -1.79
DDX58O95786 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
DDX58O95786 Y_RNA.548-201ENST00000384656 105 ntBASIC3.86□□□□□ -1.79
DDX58O95786 MIR1305-201ENST00000408300 86 ntBASIC3.86□□□□□ -1.79
DDX58O95786 MIR1290-201ENST00000408735 78 ntBASIC3.86□□□□□ -1.79
DDX58O95786 AC245291.1-201ENST00000419501 328 ntBASIC3.86□□□□□ -1.79
DDX58O95786 TMEM167AP1-201ENST00000423409 219 ntBASIC3.86□□□□□ -1.79
DDX58O95786 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.86□□□□□ -1.79
DDX58O95786 RPL7L1P10-201ENST00000427790 463 ntBASIC3.86□□□□□ -1.79
DDX58O95786 SETP5-201ENST00000437270 562 ntBASIC3.86□□□□□ -1.79
DDX58O95786 HMGN2P20-201ENST00000437531 273 ntBASIC3.86□□□□□ -1.79
DDX58O95786 MTND2P24-201ENST00000453434 806 ntBASIC3.86□□□□□ -1.79
DDX58O95786 RNA5SP310-201ENST00000459084 116 ntBASIC3.86□□□□□ -1.79
DDX58O95786 AL049714.1-201ENST00000466686 347 ntBASIC3.86□□□□□ -1.79
DDX58O95786 RPS27AP1-201ENST00000475545 471 ntBASIC3.86□□□□□ -1.79
DDX58O95786 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
DDX58O95786 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.86□□□□□ -1.79
DDX58O95786 SNORA70.16-201ENST00000516390 95 ntBASIC3.86□□□□□ -1.79
DDX58O95786 SNORA64.4-201ENST00000516632 81 ntBASIC3.86□□□□□ -1.79
DDX58O95786 AC013828.2-201ENST00000532487 235 ntBASIC3.86□□□□□ -1.79
DDX58O95786 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.86□□□□□ -1.79
DDX58O95786 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.86□□□□□ -1.79
DDX58O95786 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.86□□□□□ -1.79
DDX58O95786 MIR3921-201ENST00000577308 85 ntBASIC3.86□□□□□ -1.79
DDX58O95786 AC090616.2-202ENST00000584248 222 ntBASIC3.86□□□□□ -1.79
DDX58O95786 AC008507.1-201ENST00000587506 734 ntBASIC3.86□□□□□ -1.79
DDX58O95786 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.86□□□□□ -1.79
DDX58O95786 AC068831.7-201ENST00000616954 363 ntBASIC3.86□□□□□ -1.79
DDX58O95786 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
DDX58O95786 U7.8-201ENST00000619968 63 ntBASIC3.86□□□□□ -1.79
DDX58O95786 PLCE1P1-201ENST00000622094 305 ntBASIC3.86□□□□□ -1.79
DDX58O95786 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.86□□□□□ -1.79
DDX58O95786 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.86□□□□□ -1.79
DDX58O95786 MIR4275-201ENST00000636486 87 ntBASIC3.86□□□□□ -1.79
DDX58O95786 AL136164.4-201ENST00000625013 2135 ntBASIC3.86□□□□□ -1.79
DDX58O95786 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
DDX58O95786 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
DDX58O95786 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
DDX58O95786 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
DDX58O95786 RNU6-660P-201ENST00000364566 109 ntBASIC3.85□□□□□ -1.79
DDX58O95786 RNU6-76P-201ENST00000384060 104 ntBASIC3.85□□□□□ -1.79
DDX58O95786 MIR591-201ENST00000385290 95 ntBASIC3.85□□□□□ -1.79
DDX58O95786 AL049545.1-201ENST00000401856 572 ntBASIC3.85□□□□□ -1.79
DDX58O95786 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.85□□□□□ -1.79
DDX58O95786 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.85□□□□□ -1.79
DDX58O95786 UBE2D3P2-201ENST00000424409 445 ntBASIC3.85□□□□□ -1.79
DDX58O95786 AC022018.1-201ENST00000430685 241 ntBASIC3.85□□□□□ -1.79
DDX58O95786 UBE2D3P1-201ENST00000436669 444 ntBASIC3.85□□□□□ -1.79
DDX58O95786 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.85□□□□□ -1.79
DDX58O95786 MTND1P26-201ENST00000440488 538 ntBASIC3.85□□□□□ -1.79
DDX58O95786 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.85□□□□□ -1.79
DDX58O95786 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.85□□□□□ -1.79
DDX58O95786 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.85□□□□□ -1.79
DDX58O95786 AC012181.1-201ENST00000479895 423 ntBASIC3.85□□□□□ -1.79
DDX58O95786 AL049830.2-201ENST00000480072 201 ntBASIC3.85□□□□□ -1.79
DDX58O95786 AC080014.1-201ENST00000496877 1201 ntBASIC3.85□□□□□ -1.79
DDX58O95786 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.85□□□□□ -1.79
DDX58O95786 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
DDX58O95786 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.85□□□□□ -1.79
DDX58O95786 RNU6-798P-201ENST00000516912 103 ntBASIC3.85□□□□□ -1.79
DDX58O95786 RNU6-232P-201ENST00000517144 64 ntBASIC3.85□□□□□ -1.79
DDX58O95786 RNU6-840P-201ENST00000517275 65 ntBASIC3.85□□□□□ -1.79
DDX58O95786 AP003497.1-201ENST00000528472 562 ntBASIC3.85□□□□□ -1.79
DDX58O95786 AC087276.1-201ENST00000529659 480 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms