Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MIR5583-1-201ENST00000580941 59 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 AC209154.1-201ENST00000582156 337 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 MIR5690-201ENST00000583739 73 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 MIR3149-201ENST00000584629 83 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.35□□□□□ -1.71
CNOT4O95628 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.35□□□□□ -1.71
CNOT4O95628 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.35□□□□□ -1.71
CNOT4O95628 AC007938.3-201ENST00000604965 623 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 AL590099.1-201ENST00000615276 138 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.35□□□□□ -1.71
CNOT4O95628 AC011155.2-201ENST00000623202 216 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.35□□□□□ -1.71
CNOT4O95628 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.35□□□□□ -1.71
CNOT4O95628 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CNOT4O95628 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CNOT4O95628 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CNOT4O95628 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.35□□□□□ -1.71
CNOT4O95628 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CNOT4O95628 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CNOT4O95628 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CNOT4O95628 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CNOT4O95628 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CNOT4O95628 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CNOT4O95628 AC000374.1-201ENST00000434698 1745 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 MTND5P19-201ENST00000424872 1794 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 AL731566.1-201ENST00000620490 1937 ntBASIC4.34□□□□□ -1.71
CNOT4O95628 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CNOT4O95628 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CNOT4O95628 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CNOT4O95628 AL365440.1-201ENST00000436135 2167 ntBASIC4.34□□□□□ -1.71
CNOT4O95628 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.34□□□□□ -1.71
CNOT4O95628 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CNOT4O95628 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CNOT4O95628 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.34□□□□□ -1.71
CNOT4O95628 RNU6-1252P-201ENST00000363054 104 ntBASIC4.34□□□□□ -1.71
CNOT4O95628 AL136372.1-201ENST00000403060 228 ntBASIC4.34□□□□□ -1.71
CNOT4O95628 AC092447.6-201ENST00000414578 210 ntBASIC4.34□□□□□ -1.71
CNOT4O95628 CRYBB2P1-203ENST00000415709 538 ntBASIC4.34□□□□□ -1.71
CNOT4O95628 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.34□□□□□ -1.71
CNOT4O95628 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.34□□□□□ -1.71
CNOT4O95628 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.34□□□□□ -1.71
CNOT4O95628 AC093414.1-201ENST00000434712 514 ntBASIC4.34□□□□□ -1.71
CNOT4O95628 RPL35AP21-201ENST00000437667 333 ntBASIC4.34□□□□□ -1.71
CNOT4O95628 AF228730.2-201ENST00000438784 848 ntBASIC4.34□□□□□ -1.71
CNOT4O95628 AL031584.1-201ENST00000447169 754 ntBASIC4.34□□□□□ -1.71
CNOT4O95628 AC020550.1-201ENST00000447385 163 ntBASIC4.34□□□□□ -1.71
CNOT4O95628 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.34□□□□□ -1.71
CNOT4O95628 RPL30P15-201ENST00000457129 321 ntBASIC4.34□□□□□ -1.71
CNOT4O95628 AC010285.1-201ENST00000470580 392 ntBASIC4.34□□□□□ -1.71
CNOT4O95628 RNU6-798P-201ENST00000516912 103 ntBASIC4.34□□□□□ -1.71
CNOT4O95628 RNU6-1137P-201ENST00000517073 99 ntBASIC4.34□□□□□ -1.71
CNOT4O95628 RNA5SP454-201ENST00000517231 127 ntBASIC4.34□□□□□ -1.71
CNOT4O95628 AC105031.1-201ENST00000518550 476 ntBASIC4.34□□□□□ -1.71
CNOT4O95628 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.34□□□□□ -1.71
CNOT4O95628 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.34□□□□□ -1.71
CNOT4O95628 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CNOT4O95628 AL137161.1-201ENST00000532231 390 ntBASIC4.34□□□□□ -1.71
CNOT4O95628 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.34□□□□□ -1.71
CNOT4O95628 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.34□□□□□ -1.71
CNOT4O95628 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.34□□□□□ -1.71
CNOT4O95628 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.34□□□□□ -1.71
CNOT4O95628 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.34□□□□□ -1.71
CNOT4O95628 AC068790.4-201ENST00000602474 263 ntBASIC4.34□□□□□ -1.71
CNOT4O95628 Z82243.1-201ENST00000609432 473 ntBASIC4.34□□□□□ -1.71
CNOT4O95628 AC090425.1-201ENST00000610007 140 ntBASIC4.34□□□□□ -1.71
CNOT4O95628 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CNOT4O95628 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CNOT4O95628 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CNOT4O95628 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
CNOT4O95628 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CNOT4O95628 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
CNOT4O95628 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
CNOT4O95628 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CNOT4O95628 SCN1A-220ENST00000641603 12506 ntBASIC4.34□□□□□ -1.72
CNOT4O95628 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CNOT4O95628 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CNOT4O95628 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CNOT4O95628 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
CNOT4O95628 AC079741.1-201ENST00000321498 212 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 Y_RNA.148-201ENST00000363557 117 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 RNU6-82P-201ENST00000363970 107 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 RNA5SP505-201ENST00000364748 108 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 RNU6-629P-201ENST00000384061 103 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 Y_RNA.452-201ENST00000384202 108 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 MIR568-201ENST00000385036 95 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 UBE2V1P2-201ENST00000397758 440 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 AL121834.1-202ENST00000404494 277 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 AL591848.1-201ENST00000413092 322 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.33□□□□□ -1.72
CNOT4O95628 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.33□□□□□ -1.72
CNOT4O95628 MTCYBP9-201ENST00000431021 303 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 EZH2P1-201ENST00000431167 291 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 RPL36AP6-201ENST00000435770 321 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 AC005019.1-201ENST00000436455 431 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.33□□□□□ -1.72
CNOT4O95628 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.33□□□□□ -1.72
CNOT4O95628 RPL7AP61-201ENST00000443410 636 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.33□□□□□ -1.72
CNOT4O95628 AL353691.1-201ENST00000451332 387 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms