Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.23□□□□□ -1.89
SIX3O95343 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.23□□□□□ -1.89
SIX3O95343 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.23□□□□□ -1.89
SIX3O95343 RPL21P8-201ENST00000465083 535 ntBASIC3.23□□□□□ -1.89
SIX3O95343 RN7SL293P-201ENST00000481765 281 ntBASIC3.23□□□□□ -1.89
SIX3O95343 AC021678.1-201ENST00000505195 936 ntBASIC3.23□□□□□ -1.89
SIX3O95343 AC111000.2-201ENST00000507775 550 ntBASIC3.23□□□□□ -1.89
SIX3O95343 RNU1-143P-201ENST00000516296 146 ntBASIC3.23□□□□□ -1.89
SIX3O95343 SCARNA15.2-201ENST00000516409 127 ntBASIC3.23□□□□□ -1.89
SIX3O95343 MRPS36P3-201ENST00000519284 130 ntBASIC3.23□□□□□ -1.89
SIX3O95343 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.23□□□□□ -1.89
SIX3O95343 CASP1P1-201ENST00000526345 212 ntBASIC3.23□□□□□ -1.89
SIX3O95343 AP000867.2-201ENST00000532468 320 ntBASIC3.23□□□□□ -1.89
SIX3O95343 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SIX3O95343 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.23□□□□□ -1.89
SIX3O95343 AC012435.1-202ENST00000568772 240 ntBASIC3.23□□□□□ -1.89
SIX3O95343 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.23□□□□□ -1.89
SIX3O95343 AC107214.2-201ENST00000608204 634 ntBASIC3.23□□□□□ -1.89
SIX3O95343 U1.23-201ENST00000610293 146 ntBASIC3.23□□□□□ -1.89
SIX3O95343 uc_338.1-201ENST00000612113 180 ntBASIC3.23□□□□□ -1.89
SIX3O95343 TUG1_2.1-201ENST00000614234 87 ntBASIC3.23□□□□□ -1.89
SIX3O95343 RNU1-68P-201ENST00000615382 146 ntBASIC3.23□□□□□ -1.89
SIX3O95343 AC010133.1-201ENST00000615809 842 ntBASIC3.23□□□□□ -1.89
SIX3O95343 SNORD39.4-201ENST00000620099 78 ntBASIC3.23□□□□□ -1.89
SIX3O95343 AL356321.1-201ENST00000621360 228 ntBASIC3.23□□□□□ -1.89
SIX3O95343 U1.39-201ENST00000621562 146 ntBASIC3.23□□□□□ -1.89
SIX3O95343 AP000676.3-201ENST00000623299 569 ntBASIC3.23□□□□□ -1.89
SIX3O95343 AL392088.2-201ENST00000637607 285 ntBASIC3.23□□□□□ -1.89
SIX3O95343 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SIX3O95343 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.23□□□□□ -1.89
SIX3O95343 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.23□□□□□ -1.89
SIX3O95343 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
SIX3O95343 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.23□□□□□ -1.89
SIX3O95343 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SIX3O95343 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SIX3O95343 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.22□□□□□ -1.89
SIX3O95343 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.22□□□□□ -1.89
SIX3O95343 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SIX3O95343 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.22□□□□□ -1.89
SIX3O95343 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SIX3O95343 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SIX3O95343 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.22□□□□□ -1.89
SIX3O95343 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SIX3O95343 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SIX3O95343 RNU6-433P-201ENST00000363216 104 ntBASIC3.22□□□□□ -1.89
SIX3O95343 RNU5F-7P-201ENST00000363696 115 ntBASIC3.22□□□□□ -1.89
SIX3O95343 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
SIX3O95343 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.22□□□□□ -1.89
SIX3O95343 BX323014.1-201ENST00000412876 237 ntBASIC3.22□□□□□ -1.89
SIX3O95343 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.22□□□□□ -1.89
SIX3O95343 SPA17P1-201ENST00000416656 452 ntBASIC3.22□□□□□ -1.89
SIX3O95343 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.22□□□□□ -1.89
SIX3O95343 HSPE1P1-201ENST00000421494 318 ntBASIC3.22□□□□□ -1.89
SIX3O95343 AL158156.1-201ENST00000422509 473 ntBASIC3.22□□□□□ -1.89
SIX3O95343 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.22□□□□□ -1.89
SIX3O95343 AC234781.2-201ENST00000426370 994 ntBASIC3.22□□□□□ -1.89
SIX3O95343 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.22□□□□□ -1.89
SIX3O95343 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.22□□□□□ -1.89
SIX3O95343 CST9LP2-201ENST00000437612 320 ntBASIC3.22□□□□□ -1.89
SIX3O95343 AC092641.1-201ENST00000440229 772 ntBASIC3.22□□□□□ -1.89
SIX3O95343 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.22□□□□□ -1.89
SIX3O95343 RPL7P36-201ENST00000444633 681 ntBASIC3.22□□□□□ -1.89
SIX3O95343 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.22□□□□□ -1.89
SIX3O95343 AC092798.1-201ENST00000458542 409 ntBASIC3.22□□□□□ -1.89
SIX3O95343 MTND4LP3-201ENST00000468320 276 ntBASIC3.22□□□□□ -1.89
SIX3O95343 KCTD9P5-201ENST00000504141 1170 ntBASIC3.22□□□□□ -1.89
SIX3O95343 AC087276.1-201ENST00000529659 480 ntBASIC3.22□□□□□ -1.89
SIX3O95343 OR4T1P-201ENST00000554933 911 ntBASIC3.22□□□□□ -1.89
SIX3O95343 MIR3945-201ENST00000581853 98 ntBASIC3.22□□□□□ -1.89
SIX3O95343 AC021171.1-201ENST00000603137 706 ntBASIC3.22□□□□□ -1.89
SIX3O95343 AL133393.1-201ENST00000603277 287 ntBASIC3.22□□□□□ -1.89
SIX3O95343 PRELID3BP8-201ENST00000604148 295 ntBASIC3.22□□□□□ -1.89
SIX3O95343 HSPE1P7-201ENST00000604681 321 ntBASIC3.22□□□□□ -1.89
SIX3O95343 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.22□□□□□ -1.89
SIX3O95343 AC007038.2-201ENST00000608095 740 ntBASIC3.22□□□□□ -1.89
SIX3O95343 AC103710.1-201ENST00000610003 901 ntBASIC3.22□□□□□ -1.89
SIX3O95343 AC099778.2-201ENST00000610904 211 ntBASIC3.22□□□□□ -1.89
SIX3O95343 AL450489.1-201ENST00000612071 468 ntBASIC3.22□□□□□ -1.89
SIX3O95343 SDR42E1P2-201ENST00000614861 481 ntBASIC3.22□□□□□ -1.89
SIX3O95343 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.22□□□□□ -1.89
SIX3O95343 AL138880.2-201ENST00000616214 239 ntBASIC3.22□□□□□ -1.89
SIX3O95343 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.22□□□□□ -1.89
SIX3O95343 AC073308.1-201ENST00000623696 305 ntBASIC3.22□□□□□ -1.89
SIX3O95343 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.22□□□□□ -1.89
SIX3O95343 AC091965.5-201ENST00000624785 342 ntBASIC3.22□□□□□ -1.89
SIX3O95343 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.22□□□□□ -1.89
SIX3O95343 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.22□□□□□ -1.89
SIX3O95343 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SIX3O95343 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SIX3O95343 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SIX3O95343 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SIX3O95343 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SIX3O95343 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
SIX3O95343 GNG5P1-201ENST00000255500 204 ntBASIC3.21□□□□□ -1.9
SIX3O95343 RNA5SP252-201ENST00000391131 119 ntBASIC3.21□□□□□ -1.9
SIX3O95343 RSL24D1P4-201ENST00000400938 484 ntBASIC3.21□□□□□ -1.9
SIX3O95343 AL109755.1-201ENST00000401791 649 ntBASIC3.21□□□□□ -1.9
SIX3O95343 HSFY4P-201ENST00000415994 1181 ntBASIC3.21□□□□□ -1.9
SIX3O95343 AC245291.1-201ENST00000419501 328 ntBASIC3.21□□□□□ -1.9
SIX3O95343 NDUFB4P7-201ENST00000423198 363 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms