Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 snoZ40.1-201ENST00000364540 72 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.45□□□□□ -2.02
SEMA3DO95025 SET-203ENST00000372688 801 ntTSL 2 BASIC2.45□□□□□ -2.02
SEMA3DO95025 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SEMA3DO95025 RNU6-882P-201ENST00000391025 103 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 MTATP6P19-201ENST00000413797 659 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 OR4K6P-201ENST00000416478 897 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 USP9YP20-201ENST00000419224 558 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 AC019178.2-201ENST00000423595 505 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 AC019097.1-201ENST00000424783 735 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 AL590233.1-201ENST00000430017 456 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 MTND2P5-201ENST00000432656 1006 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.45□□□□□ -2.02
SEMA3DO95025 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.45□□□□□ -2.02
SEMA3DO95025 AC004866.2-201ENST00000438285 481 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 AP000936.2-201ENST00000447151 681 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 MTCYBP11-201ENST00000447254 1109 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 AC011753.1-201ENST00000451001 220 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 OFD1P3Y-201ENST00000453312 783 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 PNPLA4P1-201ENST00000458328 305 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 AC026410.2-201ENST00000460281 156 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 SRIP1-201ENST00000489235 288 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 AC135721.1-201ENST00000497954 479 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 TMEM251P1-201ENST00000503717 318 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 RN7SKP31-201ENST00000516354 278 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 SNORA31.11-201ENST00000516528 139 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 RNA5SP402-201ENST00000517148 110 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.45□□□□□ -2.02
SEMA3DO95025 ACTR3BP3-201ENST00000565577 979 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 MIR3912-201ENST00000577566 105 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.45□□□□□ -2.02
SEMA3DO95025 AC060766.3-201ENST00000591442 263 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 VN1R92P-201ENST00000598511 928 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 AC079089.3-201ENST00000603094 673 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 HSPE1P7-201ENST00000604681 321 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 AC012443.1-201ENST00000605605 231 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 AL137847.3-201ENST00000611521 109 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 RNU6-1192P-201ENST00000612197 107 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 MIR7106-201ENST00000612419 65 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 RNU6-489P-201ENST00000618289 107 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.45□□□□□ -2.02
SEMA3DO95025 AL138955.1-201ENST00000622881 1040 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.45□□□□□ -2.02
SEMA3DO95025 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SEMA3DO95025 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.45□□□□□ -2.02
SEMA3DO95025 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.45□□□□□ -2.02
SEMA3DO95025 AL513185.3-201ENST00000433335 1300 ntBASIC2.44□□□□□ -2.02
SEMA3DO95025 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.44□□□□□ -2.02
SEMA3DO95025 DHFRP6-201ENST00000401776 268 ntBASIC2.44□□□□□ -2.02
SEMA3DO95025 AL139039.1-201ENST00000401900 692 ntBASIC2.44□□□□□ -2.02
SEMA3DO95025 RNU6-193P-201ENST00000410977 107 ntBASIC2.44□□□□□ -2.02
SEMA3DO95025 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.44□□□□□ -2.02
SEMA3DO95025 AL356320.2-201ENST00000417263 507 ntBASIC2.44□□□□□ -2.02
SEMA3DO95025 AC007435.1-201ENST00000421086 415 ntBASIC2.44□□□□□ -2.02
SEMA3DO95025 COTL1P1-201ENST00000422309 375 ntBASIC2.44□□□□□ -2.02
SEMA3DO95025 AC063976.3-201ENST00000426849 329 ntBASIC2.44□□□□□ -2.02
SEMA3DO95025 EZH2P1-201ENST00000431167 291 ntBASIC2.44□□□□□ -2.02
SEMA3DO95025 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.44□□□□□ -2.02
SEMA3DO95025 RPS12P2-201ENST00000439728 269 ntBASIC2.44□□□□□ -2.02
SEMA3DO95025 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.44□□□□□ -2.02
SEMA3DO95025 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.44□□□□□ -2.02
SEMA3DO95025 SNRPGP6-201ENST00000451124 220 ntBASIC2.44□□□□□ -2.02
SEMA3DO95025 AL353691.1-201ENST00000451332 387 ntBASIC2.44□□□□□ -2.02
SEMA3DO95025 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.44□□□□□ -2.02
SEMA3DO95025 AL359385.1-201ENST00000456509 365 ntBASIC2.44□□□□□ -2.02
SEMA3DO95025 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.44□□□□□ -2.02
SEMA3DO95025 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.44□□□□□ -2.02
SEMA3DO95025 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.44□□□□□ -2.02
SEMA3DO95025 SNORA70.16-201ENST00000516390 95 ntBASIC2.44□□□□□ -2.02
SEMA3DO95025 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SEMA3DO95025 EIF4BP1-201ENST00000554881 351 ntBASIC2.44□□□□□ -2.02
SEMA3DO95025 LARP7P3-201ENST00000579888 337 ntBASIC2.44□□□□□ -2.02
SEMA3DO95025 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.44□□□□□ -2.02
SEMA3DO95025 AL031176.1-201ENST00000604554 466 ntBASIC2.44□□□□□ -2.02
SEMA3DO95025 AL033523.1-201ENST00000605153 153 ntBASIC2.44□□□□□ -2.02
SEMA3DO95025 AC112220.2-201ENST00000605513 533 ntBASIC2.44□□□□□ -2.02
SEMA3DO95025 MIR1322-201ENST00000638013 71 ntBASIC2.44□□□□□ -2.02
SEMA3DO95025 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.44□□□□□ -2.02
SEMA3DO95025 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.44□□□□□ -2.02
SEMA3DO95025 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SEMA3DO95025 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SEMA3DO95025 RNU6-1257P-201ENST00000384625 110 ntBASIC2.43□□□□□ -2.02
SEMA3DO95025 AL449283.1-202ENST00000418249 604 ntBASIC2.43□□□□□ -2.02
SEMA3DO95025 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.43□□□□□ -2.02
SEMA3DO95025 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.43□□□□□ -2.02
SEMA3DO95025 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.43□□□□□ -2.02
SEMA3DO95025 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.43□□□□□ -2.02
SEMA3DO95025 GTF2IP3-201ENST00000433887 494 ntBASIC2.43□□□□□ -2.02
SEMA3DO95025 USP9YP22-201ENST00000438971 294 ntBASIC2.43□□□□□ -2.02
SEMA3DO95025 MRPL42P6-201ENST00000486397 371 ntBASIC2.43□□□□□ -2.02
SEMA3DO95025 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.43□□□□□ -2.02
SEMA3DO95025 MTCYBP16-201ENST00000509187 1129 ntBASIC2.43□□□□□ -2.02
SEMA3DO95025 AC113155.1-201ENST00000511141 769 ntBASIC2.43□□□□□ -2.02
SEMA3DO95025 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.43□□□□□ -2.02
SEMA3DO95025 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.43□□□□□ -2.02
SEMA3DO95025 AC026801.2-201ENST00000515352 425 ntBASIC2.43□□□□□ -2.02
SEMA3DO95025 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.43□□□□□ -2.02
SEMA3DO95025 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.43□□□□□ -2.02
SEMA3DO95025 SUB1P1-201ENST00000524415 382 ntBASIC2.43□□□□□ -2.02
SEMA3DO95025 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms