Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SNRNP200O75643 AL354685.2-201ENST00000448218 1447 ntBASIC1.6□□□□□ -2.15
SNRNP200O75643 CENPCP1-201ENST00000533085 2578 ntBASIC1.6□□□□□ -2.15
SNRNP200O75643 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
SNRNP200O75643 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.6□□□□□ -2.15
SNRNP200O75643 AL353729.1-201ENST00000425044 720 ntBASIC1.6□□□□□ -2.15
SNRNP200O75643 AC097499.1-201ENST00000444277 208 ntBASIC1.6□□□□□ -2.15
SNRNP200O75643 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.6□□□□□ -2.15
SNRNP200O75643 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.6□□□□□ -2.15
SNRNP200O75643 RPL23AP70-201ENST00000483361 460 ntBASIC1.6□□□□□ -2.15
SNRNP200O75643 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.6□□□□□ -2.15
SNRNP200O75643 HMGB3P3-201ENST00000510526 400 ntBASIC1.6□□□□□ -2.15
SNRNP200O75643 FABP5P6-201ENST00000510588 409 ntBASIC1.6□□□□□ -2.15
SNRNP200O75643 HMGB1P47-201ENST00000511281 589 ntBASIC1.6□□□□□ -2.15
SNRNP200O75643 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.6□□□□□ -2.15
SNRNP200O75643 MIR3618-201ENST00000580330 88 ntBASIC1.6□□□□□ -2.15
SNRNP200O75643 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.6□□□□□ -2.15
SNRNP200O75643 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.6□□□□□ -2.15
SNRNP200O75643 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.6□□□□□ -2.15
SNRNP200O75643 AC107905.1-201ENST00000616204 426 ntBASIC1.6□□□□□ -2.15
SNRNP200O75643 AC108479.2-201ENST00000617314 601 ntBASIC1.6□□□□□ -2.15
SNRNP200O75643 AC068722.2-201ENST00000618734 544 ntBASIC1.6□□□□□ -2.15
SNRNP200O75643 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.6□□□□□ -2.15
SNRNP200O75643 AC119674.1-220ENST00000641502 1048 ntBASIC1.6□□□□□ -2.15
SNRNP200O75643 ZNF876P-202ENST00000398732 1485 ntBASIC1.59□□□□□ -2.15
SNRNP200O75643 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
SNRNP200O75643 ARL2BPP3-201ENST00000421226 480 ntBASIC1.59□□□□□ -2.15
SNRNP200O75643 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.59□□□□□ -2.15
SNRNP200O75643 USP9YP10-201ENST00000454868 628 ntBASIC1.59□□□□□ -2.15
SNRNP200O75643 snoU13.3-201ENST00000459441 104 ntBASIC1.59□□□□□ -2.15
SNRNP200O75643 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.59□□□□□ -2.15
SNRNP200O75643 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.59□□□□□ -2.15
SNRNP200O75643 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.59□□□□□ -2.15
SNRNP200O75643 AL136363.1-201ENST00000605349 337 ntBASIC1.59□□□□□ -2.15
SNRNP200O75643 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.59□□□□□ -2.15
SNRNP200O75643 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
SNRNP200O75643 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
SNRNP200O75643 MCTS2P-201ENST00000394552 546 ntBASIC1.58□□□□□ -2.16
SNRNP200O75643 SNRPEP2-201ENST00000397592 279 ntBASIC1.58□□□□□ -2.16
SNRNP200O75643 TATDN1P1-201ENST00000414123 891 ntBASIC1.58□□□□□ -2.16
SNRNP200O75643 Z82205.1-201ENST00000428456 297 ntBASIC1.58□□□□□ -2.16
SNRNP200O75643 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SNRNP200O75643 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.58□□□□□ -2.16
SNRNP200O75643 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.58□□□□□ -2.16
SNRNP200O75643 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.58□□□□□ -2.16
SNRNP200O75643 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.58□□□□□ -2.16
SNRNP200O75643 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.58□□□□□ -2.16
SNRNP200O75643 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.58□□□□□ -2.16
SNRNP200O75643 MIR3935-201ENST00000583472 104 ntBASIC1.58□□□□□ -2.16
SNRNP200O75643 AC012640.5-201ENST00000623897 319 ntBASIC1.58□□□□□ -2.16
SNRNP200O75643 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.58□□□□□ -2.16
SNRNP200O75643 AL049737.1-201ENST00000413920 1403 ntBASIC1.58□□□□□ -2.16
SNRNP200O75643 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SNRNP200O75643 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.58□□□□□ -2.16
SNRNP200O75643 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SNRNP200O75643 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
SNRNP200O75643 AL161781.1-201ENST00000354277 403 ntBASIC1.58□□□□□ -2.16
SNRNP200O75643 RNU1-105P-201ENST00000363470 161 ntBASIC1.58□□□□□ -2.16
SNRNP200O75643 AC019129.1-201ENST00000403786 261 ntBASIC1.58□□□□□ -2.16
SNRNP200O75643 AL021407.1-201ENST00000404531 386 ntBASIC1.58□□□□□ -2.16
SNRNP200O75643 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.58□□□□□ -2.16
SNRNP200O75643 AC234782.4-201ENST00000417646 1048 ntBASIC1.58□□□□□ -2.16
SNRNP200O75643 AC114973.1-201ENST00000429057 632 ntBASIC1.58□□□□□ -2.16
SNRNP200O75643 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.58□□□□□ -2.16
SNRNP200O75643 RPL7P12-201ENST00000446719 750 ntBASIC1.58□□□□□ -2.16
SNRNP200O75643 Z99714.1-201ENST00000450463 807 ntBASIC1.58□□□□□ -2.16
SNRNP200O75643 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SNRNP200O75643 AC108734.3-201ENST00000481241 1165 ntBASIC1.58□□□□□ -2.16
SNRNP200O75643 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.58□□□□□ -2.16
SNRNP200O75643 RNA5SP364-201ENST00000516938 78 ntBASIC1.58□□□□□ -2.16
SNRNP200O75643 SNORA31.20-201ENST00000517111 133 ntBASIC1.58□□□□□ -2.16
SNRNP200O75643 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.58□□□□□ -2.16
SNRNP200O75643 AL049870.4-201ENST00000555741 486 ntBASIC1.58□□□□□ -2.16
SNRNP200O75643 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.58□□□□□ -2.16
SNRNP200O75643 AC079610.2-201ENST00000604818 690 ntBASIC1.58□□□□□ -2.16
SNRNP200O75643 MIR502-201ENST00000606349 86 ntBASIC1.58□□□□□ -2.16
SNRNP200O75643 AC093838.1-201ENST00000613014 469 ntBASIC1.58□□□□□ -2.16
SNRNP200O75643 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SNRNP200O75643 LINC00216-201ENST00000623548 1126 ntBASIC1.58□□□□□ -2.16
SNRNP200O75643 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
SNRNP200O75643 RNA5SP190-201ENST00000365222 118 ntBASIC1.57□□□□□ -2.16
SNRNP200O75643 RNU6-1072P-201ENST00000384703 107 ntBASIC1.57□□□□□ -2.16
SNRNP200O75643 RNU6-443P-201ENST00000384780 107 ntBASIC1.57□□□□□ -2.16
SNRNP200O75643 U3.40-201ENST00000408706 208 ntBASIC1.57□□□□□ -2.16
SNRNP200O75643 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.57□□□□□ -2.16
SNRNP200O75643 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
SNRNP200O75643 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.57□□□□□ -2.16
SNRNP200O75643 RNA5SP182-201ENST00000516064 82 ntBASIC1.57□□□□□ -2.16
SNRNP200O75643 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.57□□□□□ -2.16
SNRNP200O75643 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.57□□□□□ -2.16
SNRNP200O75643 AC126177.3-201ENST00000551839 688 ntBASIC1.57□□□□□ -2.16
SNRNP200O75643 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.57□□□□□ -2.16
SNRNP200O75643 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.57□□□□□ -2.16
SNRNP200O75643 BNIP3P10-201ENST00000605360 577 ntBASIC1.57□□□□□ -2.16
SNRNP200O75643 BNIP3P7-201ENST00000605641 516 ntBASIC1.57□□□□□ -2.16
SNRNP200O75643 AC138473.1-201ENST00000605717 526 ntBASIC1.57□□□□□ -2.16
SNRNP200O75643 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.57□□□□□ -2.16
SNRNP200O75643 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SNRNP200O75643 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.57□□□□□ -2.16
SNRNP200O75643 RPL7P29-201ENST00000437151 728 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms