Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 VN1R85P-201ENST00000601587 426 ntBASIC5.06□□□□□ -1.6
VAMP4O75379 AC007687.1-201ENST00000602704 304 ntBASIC5.06□□□□□ -1.6
VAMP4O75379 AC007566.2-201ENST00000603642 413 ntBASIC5.06□□□□□ -1.6
VAMP4O75379 AL592436.1-201ENST00000605135 558 ntBASIC5.06□□□□□ -1.6
VAMP4O75379 USP12-203ENST00000620323 349 ntTSL 3 BASIC5.06□□□□□ -1.6
VAMP4O75379 AC002550.2-201ENST00000621246 394 ntBASIC5.06□□□□□ -1.6
VAMP4O75379 AC005858.4-201ENST00000623191 700 ntBASIC5.06□□□□□ -1.6
VAMP4O75379 AC090617.10-201ENST00000624308 134 ntBASIC5.06□□□□□ -1.6
VAMP4O75379 TPTEP1-208ENST00000636884 213 ntBASIC5.06□□□□□ -1.6
VAMP4O75379 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
VAMP4O75379 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
VAMP4O75379 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
VAMP4O75379 AC016588.2-201ENST00000632484 3021 ntBASIC5.05□□□□□ -1.6
VAMP4O75379 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VAMP4O75379 Y_RNA.22-201ENST00000362492 102 ntBASIC5.05□□□□□ -1.6
VAMP4O75379 Y_RNA.367-201ENST00000365544 101 ntBASIC5.05□□□□□ -1.6
VAMP4O75379 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
VAMP4O75379 MIR558-201ENST00000384920 94 ntBASIC5.05□□□□□ -1.6
VAMP4O75379 MIR454-201ENST00000390180 115 ntBASIC5.05□□□□□ -1.6
VAMP4O75379 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.05□□□□□ -1.6
VAMP4O75379 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.05□□□□□ -1.6
VAMP4O75379 AL354751.2-201ENST00000415471 210 ntBASIC5.05□□□□□ -1.6
VAMP4O75379 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.05□□□□□ -1.6
VAMP4O75379 RPL30P3-201ENST00000424262 333 ntBASIC5.05□□□□□ -1.6
VAMP4O75379 RAC1P7-201ENST00000445367 377 ntBASIC5.05□□□□□ -1.6
VAMP4O75379 MRPL50P4-201ENST00000446432 475 ntBASIC5.05□□□□□ -1.6
VAMP4O75379 AC110792.1-201ENST00000491826 472 ntBASIC5.05□□□□□ -1.6
VAMP4O75379 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.05□□□□□ -1.6
VAMP4O75379 AC108043.1-201ENST00000512696 574 ntBASIC5.05□□□□□ -1.6
VAMP4O75379 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.05□□□□□ -1.6
VAMP4O75379 GNRHR2P1-201ENST00000555315 631 ntBASIC5.05□□□□□ -1.6
VAMP4O75379 PSMA3P-201ENST00000555485 635 ntBASIC5.05□□□□□ -1.6
VAMP4O75379 AL355375.2-201ENST00000574825 175 ntBASIC5.05□□□□□ -1.6
VAMP4O75379 COX6CP3-201ENST00000580869 223 ntBASIC5.05□□□□□ -1.6
VAMP4O75379 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.05□□□□□ -1.6
VAMP4O75379 AC015813.4-201ENST00000610469 179 ntBASIC5.05□□□□□ -1.6
VAMP4O75379 Y_RNA.812-201ENST00000610788 101 ntBASIC5.05□□□□□ -1.6
VAMP4O75379 Y_RNA.784-201ENST00000613803 101 ntBASIC5.05□□□□□ -1.6
VAMP4O75379 Y_RNA.787-201ENST00000616522 101 ntBASIC5.05□□□□□ -1.6
VAMP4O75379 Y_RNA.780-201ENST00000617336 101 ntBASIC5.05□□□□□ -1.6
VAMP4O75379 Y_RNA.801-201ENST00000619005 101 ntBASIC5.05□□□□□ -1.6
VAMP4O75379 AC244100.1-202ENST00000621554 382 ntBASIC5.05□□□□□ -1.6
VAMP4O75379 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.05□□□□□ -1.6
VAMP4O75379 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.05□□□□□ -1.6
VAMP4O75379 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.05□□□□□ -1.6
VAMP4O75379 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VAMP4O75379 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
VAMP4O75379 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.05□□□□□ -1.6
VAMP4O75379 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.05□□□□□ -1.6
VAMP4O75379 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VAMP4O75379 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.05□□□□□ -1.6
VAMP4O75379 PNPT1P2-201ENST00000456768 2050 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VAMP4O75379 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
VAMP4O75379 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.04□□□□□ -1.6
VAMP4O75379 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
VAMP4O75379 HSPE1P11-201ENST00000339579 310 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 RNU5E-8P-201ENST00000363502 116 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
VAMP4O75379 RNU6-278P-201ENST00000390945 109 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 U3.29-201ENST00000391296 212 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 RPL32P23-201ENST00000397237 405 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 AL590004.1-201ENST00000405321 300 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 RNU6-193P-201ENST00000410977 107 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 RPL7AP73-201ENST00000413490 353 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.04□□□□□ -1.6
VAMP4O75379 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC5.04□□□□□ -1.6
VAMP4O75379 USP9YP20-201ENST00000419224 558 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VAMP4O75379 DUTP6-201ENST00000425573 462 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 MED13P1-201ENST00000428342 171 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 AC069285.2-201ENST00000440210 275 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 AC233279.1-201ENST00000455300 423 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 HMGN2P26-201ENST00000463169 339 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 AC006512.1-201ENST00000468816 291 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 AC126389.1-201ENST00000477436 290 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 VN1R105P-201ENST00000486595 910 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VAMP4O75379 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VAMP4O75379 HMGB1P21-201ENST00000502313 581 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 AC020893.1-201ENST00000502452 580 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 AC103851.1-201ENST00000506833 274 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 AC112206.3-201ENST00000514578 389 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.04□□□□□ -1.6
VAMP4O75379 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 IGLVIV-53-201ENST00000520107 367 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.04□□□□□ -1.6
VAMP4O75379 AC107953.1-201ENST00000522216 297 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.04□□□□□ -1.6
VAMP4O75379 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.04□□□□□ -1.6
VAMP4O75379 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.04□□□□□ -1.6
VAMP4O75379 AC120057.2-201ENST00000571520 271 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
VAMP4O75379 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.04□□□□□ -1.6
VAMP4O75379 AC022432.1-201ENST00000595739 310 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 AL606490.9-201ENST00000603331 271 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 AC113139.1-201ENST00000605049 239 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 AC004908.2-201ENST00000609090 574 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 AC093913.1-201ENST00000614178 329 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 AL590099.1-201ENST00000615276 138 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms