Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 AC024614.2-201ENST00000577584 372 ntBASIC1.42□□□□□ -2.18
URB1O60287 AC002487.1-201ENST00000604565 994 ntBASIC1.42□□□□□ -2.18
URB1O60287 AC006329.2-201ENST00000611491 394 ntBASIC1.42□□□□□ -2.18
URB1O60287 SNHG22-203ENST00000617833 660 ntBASIC1.42□□□□□ -2.18
URB1O60287 AC012640.5-201ENST00000623897 319 ntBASIC1.42□□□□□ -2.18
URB1O60287 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
URB1O60287 HMGB3P2-201ENST00000411913 584 ntBASIC1.42□□□□□ -2.18
URB1O60287 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.42□□□□□ -2.18
URB1O60287 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC1.42□□□□□ -2.18
URB1O60287 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.42□□□□□ -2.18
URB1O60287 RPS15AP7-201ENST00000439294 405 ntBASIC1.42□□□□□ -2.18
URB1O60287 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.42□□□□□ -2.18
URB1O60287 AC104115.2-201ENST00000523026 687 ntBASIC1.42□□□□□ -2.18
URB1O60287 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
URB1O60287 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
URB1O60287 MIR4446-201ENST00000578505 67 ntBASIC1.42□□□□□ -2.18
URB1O60287 MIR7973-1-201ENST00000614683 76 ntBASIC1.42□□□□□ -2.18
URB1O60287 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
URB1O60287 MIR607-201ENST00000385241 96 ntBASIC1.41□□□□□ -2.18
URB1O60287 RNA5SP489-201ENST00000410986 109 ntBASIC1.41□□□□□ -2.18
URB1O60287 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.41□□□□□ -2.18
URB1O60287 RPL17P12-201ENST00000413391 526 ntBASIC1.41□□□□□ -2.18
URB1O60287 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.41□□□□□ -2.18
URB1O60287 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.41□□□□□ -2.18
URB1O60287 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.41□□□□□ -2.18
URB1O60287 AC005912.1-201ENST00000495392 255 ntBASIC1.41□□□□□ -2.18
URB1O60287 AC245128.3-201ENST00000594721 748 ntBASIC1.41□□□□□ -2.18
URB1O60287 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.41□□□□□ -2.18
URB1O60287 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
URB1O60287 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
URB1O60287 RNU6-50P-201ENST00000362356 103 ntBASIC1.41□□□□□ -2.18
URB1O60287 RNA5SP393-201ENST00000363423 117 ntBASIC1.41□□□□□ -2.18
URB1O60287 SNORA51.2-201ENST00000364595 132 ntBASIC1.41□□□□□ -2.18
URB1O60287 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
URB1O60287 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.41□□□□□ -2.18
URB1O60287 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.41□□□□□ -2.18
URB1O60287 RAB9AP5-201ENST00000437794 597 ntBASIC1.41□□□□□ -2.18
URB1O60287 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
URB1O60287 RAB9AP2-201ENST00000443911 597 ntBASIC1.41□□□□□ -2.18
URB1O60287 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.41□□□□□ -2.18
URB1O60287 AC009901.1-201ENST00000506703 541 ntBASIC1.41□□□□□ -2.18
URB1O60287 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC1.41□□□□□ -2.18
URB1O60287 SETP2-201ENST00000553886 926 ntBASIC1.41□□□□□ -2.18
URB1O60287 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.41□□□□□ -2.18
URB1O60287 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
URB1O60287 RNA5SP27-201ENST00000363839 119 ntBASIC1.4□□□□□ -2.19
URB1O60287 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.4□□□□□ -2.19
URB1O60287 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC1.4□□□□□ -2.19
URB1O60287 KATNBL1P3-201ENST00000443475 909 ntBASIC1.4□□□□□ -2.19
URB1O60287 MTCO3P35-201ENST00000485582 781 ntBASIC1.4□□□□□ -2.19
URB1O60287 HSPE1P20-201ENST00000538133 289 ntBASIC1.4□□□□□ -2.19
URB1O60287 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.4□□□□□ -2.19
URB1O60287 AC116563.2-201ENST00000624751 535 ntBASIC1.4□□□□□ -2.19
URB1O60287 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
URB1O60287 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
URB1O60287 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
URB1O60287 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
URB1O60287 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
URB1O60287 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.19
URB1O60287 AL357078.2-201ENST00000416486 427 ntBASIC1.4□□□□□ -2.19
URB1O60287 TRIM60P13-201ENST00000432350 1283 ntBASIC1.4□□□□□ -2.19
URB1O60287 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.4□□□□□ -2.19
URB1O60287 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.4□□□□□ -2.19
URB1O60287 AC010625.1-201ENST00000511296 403 ntBASIC1.4□□□□□ -2.19
URB1O60287 FABP5P5-201ENST00000515537 406 ntBASIC1.4□□□□□ -2.19
URB1O60287 AC016957.1-201ENST00000534895 309 ntBASIC1.4□□□□□ -2.19
URB1O60287 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.4□□□□□ -2.19
URB1O60287 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.4□□□□□ -2.19
URB1O60287 AC009220.3-201ENST00000604318 586 ntBASIC1.4□□□□□ -2.19
URB1O60287 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC1.4□□□□□ -2.19
URB1O60287 AC008121.3-201ENST00000618726 433 ntBASIC1.4□□□□□ -2.19
URB1O60287 MIR6767-201ENST00000637302 66 ntBASIC1.4□□□□□ -2.19
URB1O60287 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.4□□□□□ -2.19
URB1O60287 HMGN2P38-201ENST00000423806 265 ntBASIC1.39□□□□□ -2.19
URB1O60287 RPL37P25-201ENST00000507308 276 ntBASIC1.39□□□□□ -2.19
URB1O60287 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.39□□□□□ -2.19
URB1O60287 AC109446.2-201ENST00000567872 497 ntBASIC1.39□□□□□ -2.19
URB1O60287 DUXAP4-201ENST00000603046 613 ntBASIC1.39□□□□□ -2.19
URB1O60287 AC091895.1-201ENST00000624494 256 ntBASIC1.39□□□□□ -2.19
URB1O60287 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.38□□□□□ -2.19
URB1O60287 USP9YP10-201ENST00000454868 628 ntBASIC1.38□□□□□ -2.19
URB1O60287 RPL21P103-201ENST00000479921 488 ntBASIC1.38□□□□□ -2.19
URB1O60287 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.38□□□□□ -2.19
URB1O60287 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
URB1O60287 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.38□□□□□ -2.19
URB1O60287 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.38□□□□□ -2.19
URB1O60287 AC023813.2-201ENST00000564321 469 ntBASIC1.38□□□□□ -2.19
URB1O60287 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.38□□□□□ -2.19
URB1O60287 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
URB1O60287 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
URB1O60287 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.38□□□□□ -2.19
URB1O60287 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.38□□□□□ -2.19
URB1O60287 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.38□□□□□ -2.19
URB1O60287 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
URB1O60287 SNORA16.1-201ENST00000364597 132 ntBASIC1.38□□□□□ -2.19
URB1O60287 RNU1-93P-201ENST00000364704 169 ntBASIC1.38□□□□□ -2.19
URB1O60287 RNU2-25P-201ENST00000411041 191 ntBASIC1.38□□□□□ -2.19
URB1O60287 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.38□□□□□ -2.19
URB1O60287 AC244098.2-201ENST00000422068 99 ntBASIC1.38□□□□□ -2.19
URB1O60287 AC093084.1-201ENST00000424233 687 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms