Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PRPF3O43395 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
PRPF3O43395 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PRPF3O43395 AC118273.1-201ENST00000525324 3006 ntBASIC4.35□□□□□ -1.71
PRPF3O43395 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PRPF3O43395 EXOC5P1-201ENST00000510543 1969 ntBASIC4.34□□□□□ -1.71
PRPF3O43395 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.34□□□□□ -1.71
PRPF3O43395 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PRPF3O43395 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
PRPF3O43395 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PRPF3O43395 RNU6-511P-201ENST00000363496 107 ntBASIC4.34□□□□□ -1.71
PRPF3O43395 Y_RNA.296-201ENST00000364930 108 ntBASIC4.34□□□□□ -1.71
PRPF3O43395 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PRPF3O43395 RNU1-89P-201ENST00000384592 164 ntBASIC4.34□□□□□ -1.71
PRPF3O43395 RNA5SP424-201ENST00000390988 115 ntBASIC4.34□□□□□ -1.71
PRPF3O43395 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.34□□□□□ -1.71
PRPF3O43395 Y_RNA.599-201ENST00000410489 109 ntBASIC4.34□□□□□ -1.71
PRPF3O43395 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.34□□□□□ -1.71
PRPF3O43395 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.34□□□□□ -1.71
PRPF3O43395 AC104651.1-201ENST00000427559 735 ntBASIC4.34□□□□□ -1.71
PRPF3O43395 AC079780.1-201ENST00000428259 207 ntBASIC4.34□□□□□ -1.71
PRPF3O43395 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.34□□□□□ -1.71
PRPF3O43395 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.34□□□□□ -1.71
PRPF3O43395 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PRPF3O43395 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.34□□□□□ -1.71
PRPF3O43395 AL662791.1-201ENST00000441992 928 ntBASIC4.34□□□□□ -1.71
PRPF3O43395 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.34□□□□□ -1.71
PRPF3O43395 AL133162.1-201ENST00000463228 453 ntBASIC4.34□□□□□ -1.71
PRPF3O43395 AC020893.1-201ENST00000502452 580 ntBASIC4.34□□□□□ -1.71
PRPF3O43395 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.34□□□□□ -1.71
PRPF3O43395 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.34□□□□□ -1.71
PRPF3O43395 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.34□□□□□ -1.71
PRPF3O43395 AL355836.1-201ENST00000555951 870 ntBASIC4.34□□□□□ -1.71
PRPF3O43395 AL845331.3-202ENST00000562856 261 ntBASIC4.34□□□□□ -1.71
PRPF3O43395 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.34□□□□□ -1.71
PRPF3O43395 ZNF192P1-203ENST00000565888 810 ntBASIC4.34□□□□□ -1.71
PRPF3O43395 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.34□□□□□ -1.71
PRPF3O43395 MIR5187-201ENST00000583479 76 ntBASIC4.34□□□□□ -1.71
PRPF3O43395 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.34□□□□□ -1.71
PRPF3O43395 AC004492.1-201ENST00000607036 742 ntBASIC4.34□□□□□ -1.71
PRPF3O43395 AL391813.2-201ENST00000609113 322 ntBASIC4.34□□□□□ -1.71
PRPF3O43395 MIR486-1-201ENST00000612171 68 ntBASIC4.34□□□□□ -1.71
PRPF3O43395 AC006338.1-201ENST00000618453 749 ntBASIC4.34□□□□□ -1.71
PRPF3O43395 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.34□□□□□ -1.71
PRPF3O43395 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.34□□□□□ -1.71
PRPF3O43395 AP004289.2-201ENST00000444413 1457 ntBASIC4.34□□□□□ -1.71
PRPF3O43395 AC010733.2-201ENST00000589496 5702 ntBASIC4.34□□□□□ -1.71
PRPF3O43395 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PRPF3O43395 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PRPF3O43395 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PRPF3O43395 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PRPF3O43395 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PRPF3O43395 MAPK10-373ENST00000641983 6772 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PRPF3O43395 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PRPF3O43395 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.33□□□□□ -1.72
PRPF3O43395 MTND5P26-201ENST00000426018 1752 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PRPF3O43395 GABPAP-201ENST00000419271 1356 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 AC073343.1-201ENST00000328239 651 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 RNU6-108P-201ENST00000365558 107 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 RNU6-1103P-201ENST00000384150 107 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 SNORA36C-201ENST00000384289 132 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 RNU6-1215P-201ENST00000384441 102 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 RPL32P23-201ENST00000397237 405 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 AL359634.1-202ENST00000404721 284 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 GSTA9P-201ENST00000406231 611 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 Y_RNA.619-201ENST00000410951 90 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 AF274854.1-201ENST00000413236 615 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.33□□□□□ -1.72
PRPF3O43395 RPL21P109-201ENST00000422213 475 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.33□□□□□ -1.72
PRPF3O43395 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.33□□□□□ -1.72
PRPF3O43395 AC104850.1-201ENST00000435940 476 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.33□□□□□ -1.72
PRPF3O43395 RPS20P20-201ENST00000460498 340 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 RN7SL432P-201ENST00000484057 298 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 AP001086.1-201ENST00000494882 321 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.33□□□□□ -1.72
PRPF3O43395 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.33□□□□□ -1.72
PRPF3O43395 RN7SKP209-201ENST00000516888 304 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.33□□□□□ -1.72
PRPF3O43395 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.33□□□□□ -1.72
PRPF3O43395 RPS3AP4-201ENST00000555161 764 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.33□□□□□ -1.72
PRPF3O43395 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.33□□□□□ -1.72
PRPF3O43395 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.33□□□□□ -1.72
PRPF3O43395 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.33□□□□□ -1.72
PRPF3O43395 MIR4293-201ENST00000584305 78 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.33□□□□□ -1.72
PRPF3O43395 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.33□□□□□ -1.72
PRPF3O43395 AC025165.5-201ENST00000602802 578 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.33□□□□□ -1.72
PRPF3O43395 MIR98-201ENST00000606724 119 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.33□□□□□ -1.72
PRPF3O43395 AC010133.1-201ENST00000615809 842 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PRPF3O43395 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.33□□□□□ -1.72
PRPF3O43395 AC034229.5-201ENST00000624258 185 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms