Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC027290.2-201ENST00000623210 18662 ntBASIC4.95□□□□□ -1.62
SRGAP3O43295 AP004289.2-201ENST00000444413 1457 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SRGAP3O43295 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SRGAP3O43295 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SRGAP3O43295 RNU6-97P-201ENST00000363387 104 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 Y_RNA.202-201ENST00000364083 110 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 Y_RNA.367-201ENST00000365544 101 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 RNU4-48P-201ENST00000365559 182 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 RNU4-20P-201ENST00000365601 151 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SRGAP3O43295 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SRGAP3O43295 RNU6-1297P-201ENST00000384415 104 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 RNU6-831P-201ENST00000384548 107 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SRGAP3O43295 SNORA3C-201ENST00000408792 125 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 RNU4-26P-201ENST00000410270 107 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.94□□□□□ -1.62
SRGAP3O43295 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.94□□□□□ -1.62
SRGAP3O43295 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.94□□□□□ -1.62
SRGAP3O43295 AL590233.1-201ENST00000430017 456 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 RPS20P5-201ENST00000434808 360 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SRGAP3O43295 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.94□□□□□ -1.62
SRGAP3O43295 snoU13.8-201ENST00000458890 104 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 RNU6-1218P-201ENST00000458990 108 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 Y_RNA.631-201ENST00000459607 101 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 GMFBP1-201ENST00000467831 427 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 AC006511.1-201ENST00000470614 315 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 AC027575.1-201ENST00000481064 460 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 AC005726.1-201ENST00000494679 427 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.94□□□□□ -1.62
SRGAP3O43295 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
SRGAP3O43295 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.94□□□□□ -1.62
SRGAP3O43295 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.94□□□□□ -1.62
SRGAP3O43295 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.94□□□□□ -1.62
SRGAP3O43295 NCAPGP2-201ENST00000557911 754 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.94□□□□□ -1.62
SRGAP3O43295 AC018552.3-201ENST00000567416 561 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.94□□□□□ -1.62
SRGAP3O43295 AC008737.2-201ENST00000599446 118 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 AL592436.1-201ENST00000605135 558 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 AC080078.3-201ENST00000605407 463 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 RNU6-89P-201ENST00000606519 100 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.94□□□□□ -1.62
SRGAP3O43295 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.94□□□□□ -1.62
SRGAP3O43295 AL159972.1-201ENST00000625150 448 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 MTND4LP32-201ENST00000636111 270 ntBASIC4.94□□□□□ -1.62
SRGAP3O43295 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SRGAP3O43295 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.94□□□□□ -1.62
SRGAP3O43295 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SRGAP3O43295 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SRGAP3O43295 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SRGAP3O43295 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SRGAP3O43295 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.93□□□□□ -1.62
SRGAP3O43295 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
SRGAP3O43295 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SRGAP3O43295 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SRGAP3O43295 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SRGAP3O43295 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SRGAP3O43295 RNU4-66P-201ENST00000365199 138 ntBASIC4.93□□□□□ -1.62
SRGAP3O43295 SNORD42.2-201ENST00000365570 69 ntBASIC4.93□□□□□ -1.62
SRGAP3O43295 Y_RNA.445-201ENST00000384168 102 ntBASIC4.93□□□□□ -1.62
SRGAP3O43295 Y_RNA.459-201ENST00000384251 102 ntBASIC4.93□□□□□ -1.62
SRGAP3O43295 SNORA57.1-201ENST00000391227 145 ntBASIC4.93□□□□□ -1.62
SRGAP3O43295 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SRGAP3O43295 BEND7P1-201ENST00000422058 457 ntBASIC4.93□□□□□ -1.62
SRGAP3O43295 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.93□□□□□ -1.62
SRGAP3O43295 RPS26P56-201ENST00000444468 240 ntBASIC4.93□□□□□ -1.62
SRGAP3O43295 RPL7P52-201ENST00000449200 742 ntBASIC4.93□□□□□ -1.62
SRGAP3O43295 AC022431.1-201ENST00000450941 438 ntBASIC4.93□□□□□ -1.62
SRGAP3O43295 AL136126.1-201ENST00000473603 402 ntBASIC4.93□□□□□ -1.62
SRGAP3O43295 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SRGAP3O43295 AC087879.1-201ENST00000474343 374 ntBASIC4.93□□□□□ -1.62
SRGAP3O43295 RPL21P99-201ENST00000480369 423 ntBASIC4.93□□□□□ -1.62
SRGAP3O43295 VN1R105P-201ENST00000486595 910 ntBASIC4.93□□□□□ -1.62
SRGAP3O43295 AC090096.1-201ENST00000489168 390 ntBASIC4.93□□□□□ -1.62
SRGAP3O43295 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.93□□□□□ -1.62
SRGAP3O43295 AC004062.1-201ENST00000509926 645 ntBASIC4.93□□□□□ -1.62
SRGAP3O43295 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.93□□□□□ -1.62
SRGAP3O43295 AL355836.1-201ENST00000555951 870 ntBASIC4.93□□□□□ -1.62
SRGAP3O43295 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SRGAP3O43295 RN7SL703P-201ENST00000578485 302 ntBASIC4.93□□□□□ -1.62
SRGAP3O43295 AC053481.4-201ENST00000583164 216 ntBASIC4.93□□□□□ -1.62
SRGAP3O43295 UBE2L4-201ENST00000587688 464 ntBASIC4.93□□□□□ -1.62
SRGAP3O43295 GLUD1P4-201ENST00000590914 418 ntBASIC4.93□□□□□ -1.62
SRGAP3O43295 AL606490.9-201ENST00000603331 271 ntBASIC4.93□□□□□ -1.62
SRGAP3O43295 OR6R2P-201ENST00000609216 300 ntBASIC4.93□□□□□ -1.62
SRGAP3O43295 AC084781.2-201ENST00000615568 161 ntBASIC4.93□□□□□ -1.62
SRGAP3O43295 AC040168.1-201ENST00000623594 991 ntBASIC4.93□□□□□ -1.62
SRGAP3O43295 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.93□□□□□ -1.62
SRGAP3O43295 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SRGAP3O43295 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.93□□□□□ -1.62
SRGAP3O43295 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SRGAP3O43295 AC097714.1-201ENST00000511272 1647 ntBASIC4.93□□□□□ -1.62
SRGAP3O43295 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.93□□□□□ -1.62
SRGAP3O43295 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.93□□□□□ -1.62
SRGAP3O43295 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SRGAP3O43295 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms