Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AC012414.2-201ENST00000559474 187 ntBASIC1.75□□□□□ -2.13
HMGB3O15347 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.75□□□□□ -2.13
HMGB3O15347 MIR4325-201ENST00000583049 90 ntBASIC1.75□□□□□ -2.13
HMGB3O15347 SRGNP1-201ENST00000603392 451 ntBASIC1.75□□□□□ -2.13
HMGB3O15347 AC021749.1-201ENST00000604322 607 ntBASIC1.75□□□□□ -2.13
HMGB3O15347 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.75□□□□□ -2.13
HMGB3O15347 AC046143.2-201ENST00000609789 160 ntBASIC1.75□□□□□ -2.13
HMGB3O15347 AC096586.1-201ENST00000610267 561 ntBASIC1.75□□□□□ -2.13
HMGB3O15347 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.75□□□□□ -2.13
HMGB3O15347 AP000648.3-201ENST00000623539 4507 ntBASIC1.75□□□□□ -2.13
HMGB3O15347 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HMGB3O15347 RNA5SP160-201ENST00000364866 120 ntBASIC1.74□□□□□ -2.13
HMGB3O15347 RNU2-15P-201ENST00000410692 191 ntBASIC1.74□□□□□ -2.13
HMGB3O15347 RN7SKP140-201ENST00000411196 284 ntBASIC1.74□□□□□ -2.13
HMGB3O15347 HMGB3P2-201ENST00000411913 584 ntBASIC1.74□□□□□ -2.13
HMGB3O15347 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.74□□□□□ -2.13
HMGB3O15347 HMGB1P11-201ENST00000413899 637 ntBASIC1.74□□□□□ -2.13
HMGB3O15347 RPS7P9-201ENST00000414704 586 ntBASIC1.74□□□□□ -2.13
HMGB3O15347 AC005005.2-201ENST00000420779 380 ntBASIC1.74□□□□□ -2.13
HMGB3O15347 BEND7P1-201ENST00000422058 457 ntBASIC1.74□□□□□ -2.13
HMGB3O15347 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.74□□□□□ -2.13
HMGB3O15347 SDR42E1P3-201ENST00000438345 502 ntBASIC1.74□□□□□ -2.13
HMGB3O15347 AL929288.2-201ENST00000446368 407 ntBASIC1.74□□□□□ -2.13
HMGB3O15347 AC104978.1-201ENST00000449387 391 ntBASIC1.74□□□□□ -2.13
HMGB3O15347 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.74□□□□□ -2.13
HMGB3O15347 AL021397.1-201ENST00000451806 248 ntBASIC1.74□□□□□ -2.13
HMGB3O15347 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.74□□□□□ -2.13
HMGB3O15347 RNU5F-8P-201ENST00000515941 111 ntBASIC1.74□□□□□ -2.13
HMGB3O15347 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.74□□□□□ -2.13
HMGB3O15347 ARL2BPP5-201ENST00000523141 481 ntBASIC1.74□□□□□ -2.13
HMGB3O15347 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.74□□□□□ -2.13
HMGB3O15347 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.74□□□□□ -2.13
HMGB3O15347 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HMGB3O15347 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.74□□□□□ -2.13
HMGB3O15347 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.74□□□□□ -2.13
HMGB3O15347 MIR3935-201ENST00000583472 104 ntBASIC1.74□□□□□ -2.13
HMGB3O15347 ELOCP29-201ENST00000588193 334 ntBASIC1.74□□□□□ -2.13
HMGB3O15347 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.74□□□□□ -2.13
HMGB3O15347 GAS5-AS1-201ENST00000602767 694 ntBASIC1.74□□□□□ -2.13
HMGB3O15347 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
HMGB3O15347 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HMGB3O15347 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HMGB3O15347 MTND5P11-201ENST00000511037 1812 ntBASIC1.73□□□□□ -2.13
HMGB3O15347 AC008432.1-201ENST00000615912 1320 ntBASIC1.73□□□□□ -2.13
HMGB3O15347 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.73□□□□□ -2.13
HMGB3O15347 RNU6-525P-201ENST00000363685 104 ntBASIC1.73□□□□□ -2.13
HMGB3O15347 SNORD115-48-201ENST00000364764 76 ntBASIC1.73□□□□□ -2.13
HMGB3O15347 CIR1P3-201ENST00000405137 479 ntBASIC1.73□□□□□ -2.13
HMGB3O15347 RNU2-43P-201ENST00000410306 190 ntBASIC1.73□□□□□ -2.13
HMGB3O15347 RNU2-47P-201ENST00000410649 186 ntBASIC1.73□□□□□ -2.13
HMGB3O15347 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.73□□□□□ -2.13
HMGB3O15347 NANOGP5-201ENST00000424456 877 ntBASIC1.73□□□□□ -2.13
HMGB3O15347 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.73□□□□□ -2.13
HMGB3O15347 AL356867.1-201ENST00000429623 299 ntBASIC1.73□□□□□ -2.13
HMGB3O15347 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.73□□□□□ -2.13
HMGB3O15347 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC1.73□□□□□ -2.13
HMGB3O15347 HGF-207ENST00000453018 721 ntTSL 3 BASIC1.73□□□□□ -2.13
HMGB3O15347 KLF3P2-201ENST00000465138 268 ntBASIC1.73□□□□□ -2.13
HMGB3O15347 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.73□□□□□ -2.13
HMGB3O15347 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.73□□□□□ -2.13
HMGB3O15347 MTCYBP20-201ENST00000524239 1129 ntBASIC1.73□□□□□ -2.13
HMGB3O15347 AC124293.1-201ENST00000530034 493 ntBASIC1.73□□□□□ -2.13
HMGB3O15347 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.73□□□□□ -2.13
HMGB3O15347 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.73□□□□□ -2.13
HMGB3O15347 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.73□□□□□ -2.13
HMGB3O15347 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.73□□□□□ -2.13
HMGB3O15347 MIR5571-201ENST00000577998 113 ntBASIC1.73□□□□□ -2.13
HMGB3O15347 BPTFP1-201ENST00000579209 492 ntBASIC1.73□□□□□ -2.13
HMGB3O15347 AC002984.1-201ENST00000591692 448 ntBASIC1.73□□□□□ -2.13
HMGB3O15347 AL096840.1-201ENST00000603287 93 ntBASIC1.73□□□□□ -2.13
HMGB3O15347 AC007621.1-201ENST00000604544 437 ntBASIC1.73□□□□□ -2.13
HMGB3O15347 AC120053.1-201ENST00000607706 736 ntBASIC1.73□□□□□ -2.13
HMGB3O15347 AC092954.1-201ENST00000609121 445 ntBASIC1.73□□□□□ -2.13
HMGB3O15347 AC107294.1-201ENST00000609524 467 ntBASIC1.73□□□□□ -2.13
HMGB3O15347 AL731566.2-201ENST00000618971 317 ntBASIC1.73□□□□□ -2.13
HMGB3O15347 AC009831.4-201ENST00000620744 325 ntBASIC1.73□□□□□ -2.13
HMGB3O15347 Z99496.1-201ENST00000469424 1477 ntBASIC1.73□□□□□ -2.13
HMGB3O15347 OR4G11P-202ENST00000642116 1414 ntBASIC1.73□□□□□ -2.13
HMGB3O15347 AC103710.2-202ENST00000641454 2853 ntBASIC1.72□□□□□ -2.13
HMGB3O15347 RNU6-251P-201ENST00000363235 104 ntBASIC1.72□□□□□ -2.13
HMGB3O15347 RNU6-619P-201ENST00000365146 108 ntBASIC1.72□□□□□ -2.13
HMGB3O15347 RNU6-1005P-201ENST00000384519 107 ntBASIC1.72□□□□□ -2.13
HMGB3O15347 SNORA67.4-201ENST00000384688 142 ntBASIC1.72□□□□□ -2.13
HMGB3O15347 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.72□□□□□ -2.13
HMGB3O15347 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HMGB3O15347 MYL8P-204ENST00000431574 518 ntBASIC1.72□□□□□ -2.13
HMGB3O15347 AC236972.1-201ENST00000433225 199 ntBASIC1.72□□□□□ -2.13
HMGB3O15347 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.72□□□□□ -2.13
HMGB3O15347 AC018634.1-201ENST00000437554 401 ntBASIC1.72□□□□□ -2.13
HMGB3O15347 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.72□□□□□ -2.13
HMGB3O15347 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HMGB3O15347 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.72□□□□□ -2.13
HMGB3O15347 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC1.72□□□□□ -2.13
HMGB3O15347 AC090453.1-201ENST00000495560 436 ntBASIC1.72□□□□□ -2.13
HMGB3O15347 AC011352.3-201ENST00000505162 593 ntBASIC1.72□□□□□ -2.13
HMGB3O15347 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.72□□□□□ -2.13
HMGB3O15347 AC234781.5-201ENST00000508429 271 ntBASIC1.72□□□□□ -2.13
HMGB3O15347 AC114786.4-201ENST00000508771 728 ntBASIC1.72□□□□□ -2.13
HMGB3O15347 AC114797.1-201ENST00000514003 728 ntBASIC1.72□□□□□ -2.13
HMGB3O15347 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms