Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.75□□□□□ -1.97
AP3B1O00203 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.75□□□□□ -1.97
AP3B1O00203 AC004486.1-201ENST00000546846 233 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 AL132857.1-201ENST00000555180 708 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.75□□□□□ -1.97
AP3B1O00203 MIR5708-201ENST00000579723 85 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 MIR5194-201ENST00000582634 120 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.75□□□□□ -1.97
AP3B1O00203 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.75□□□□□ -1.97
AP3B1O00203 AL161756.2-201ENST00000604597 246 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 AL392048.1-201ENST00000613946 534 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 AC002550.2-201ENST00000621246 394 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
AP3B1O00203 PABPC1P9-201ENST00000426076 1612 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
AP3B1O00203 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
AP3B1O00203 RNA5SP393-201ENST00000363423 117 ntBASIC2.74□□□□□ -1.97
AP3B1O00203 RNU5B-4P-201ENST00000363508 111 ntBASIC2.74□□□□□ -1.97
AP3B1O00203 SNORD46.1-201ENST00000364139 104 ntBASIC2.74□□□□□ -1.97
AP3B1O00203 MIR9-1-201ENST00000385198 89 ntBASIC2.74□□□□□ -1.97
AP3B1O00203 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.74□□□□□ -1.97
AP3B1O00203 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.74□□□□□ -1.97
AP3B1O00203 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.74□□□□□ -1.97
AP3B1O00203 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.74□□□□□ -1.97
AP3B1O00203 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.74□□□□□ -1.97
AP3B1O00203 AC087499.2-201ENST00000432861 149 ntBASIC2.74□□□□□ -1.97
AP3B1O00203 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.74□□□□□ -1.97
AP3B1O00203 BNIP3P2-201ENST00000441221 577 ntBASIC2.74□□□□□ -1.97
AP3B1O00203 OR10R1P-201ENST00000441524 1141 ntBASIC2.74□□□□□ -1.97
AP3B1O00203 ST13P20-201ENST00000447996 1065 ntBASIC2.74□□□□□ -1.97
AP3B1O00203 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.74□□□□□ -1.97
AP3B1O00203 AP000852.1-201ENST00000472460 573 ntBASIC2.74□□□□□ -1.97
AP3B1O00203 SUMO2P6-201ENST00000505273 288 ntBASIC2.74□□□□□ -1.97
AP3B1O00203 HIGD1AP13-201ENST00000509878 289 ntBASIC2.74□□□□□ -1.97
AP3B1O00203 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.74□□□□□ -1.97
AP3B1O00203 RNU6-840P-201ENST00000517275 65 ntBASIC2.74□□□□□ -1.97
AP3B1O00203 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.74□□□□□ -1.97
AP3B1O00203 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.74□□□□□ -1.97
AP3B1O00203 MTATP6P2-201ENST00000603319 678 ntBASIC2.74□□□□□ -1.97
AP3B1O00203 AL390208.1-201ENST00000605885 644 ntBASIC2.74□□□□□ -1.97
AP3B1O00203 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.74□□□□□ -1.97
AP3B1O00203 AC013476.2-201ENST00000614456 459 ntBASIC2.74□□□□□ -1.97
AP3B1O00203 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
AP3B1O00203 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
AP3B1O00203 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.74□□□□□ -1.97
AP3B1O00203 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
AP3B1O00203 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
AP3B1O00203 RNU1-138P-201ENST00000384093 164 ntBASIC2.73□□□□□ -1.97
AP3B1O00203 RNU6-217P-201ENST00000384164 104 ntBASIC2.73□□□□□ -1.97
AP3B1O00203 AL138827.1-201ENST00000402666 306 ntBASIC2.73□□□□□ -1.97
AP3B1O00203 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.73□□□□□ -1.97
AP3B1O00203 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.73□□□□□ -1.97
AP3B1O00203 HMGB1P49-201ENST00000418882 569 ntBASIC2.73□□□□□ -1.97
AP3B1O00203 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.73□□□□□ -1.97
AP3B1O00203 USP9YP22-201ENST00000438971 294 ntBASIC2.73□□□□□ -1.97
AP3B1O00203 CYCSP32-201ENST00000440548 321 ntBASIC2.73□□□□□ -1.97
AP3B1O00203 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.73□□□□□ -1.97
AP3B1O00203 AC104389.3-201ENST00000445629 235 ntBASIC2.73□□□□□ -1.97
AP3B1O00203 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.73□□□□□ -1.97
AP3B1O00203 AP000705.1-201ENST00000454567 350 ntBASIC2.73□□□□□ -1.97
AP3B1O00203 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.73□□□□□ -1.97
AP3B1O00203 RPS29P26-201ENST00000477483 171 ntBASIC2.73□□□□□ -1.97
AP3B1O00203 RPL9P33-201ENST00000484311 566 ntBASIC2.73□□□□□ -1.97
AP3B1O00203 LARP1BP2-201ENST00000486594 519 ntBASIC2.73□□□□□ -1.97
AP3B1O00203 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.73□□□□□ -1.97
AP3B1O00203 SNORA74D-201ENST00000516404 141 ntBASIC2.73□□□□□ -1.97
AP3B1O00203 AC087808.1-201ENST00000520501 361 ntBASIC2.73□□□□□ -1.97
AP3B1O00203 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.73□□□□□ -1.97
AP3B1O00203 AP003168.1-201ENST00000530091 307 ntBASIC2.73□□□□□ -1.97
AP3B1O00203 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.73□□□□□ -1.97
AP3B1O00203 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.73□□□□□ -1.97
AP3B1O00203 AL391261.3-201ENST00000557194 520 ntBASIC2.73□□□□□ -1.97
AP3B1O00203 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.73□□□□□ -1.97
AP3B1O00203 AL049779.4-201ENST00000604500 156 ntBASIC2.73□□□□□ -1.97
AP3B1O00203 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
AP3B1O00203 AC135507.1-201ENST00000607214 561 ntBASIC2.73□□□□□ -1.97
AP3B1O00203 BX664608.1-201ENST00000610519 487 ntBASIC2.73□□□□□ -1.97
AP3B1O00203 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.73□□□□□ -1.97
AP3B1O00203 AC008498.1-201ENST00000613012 531 ntBASIC2.73□□□□□ -1.97
AP3B1O00203 AL449363.1-201ENST00000617815 186 ntBASIC2.73□□□□□ -1.97
AP3B1O00203 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.73□□□□□ -1.97
AP3B1O00203 AC068880.4-201ENST00000623082 495 ntBASIC2.73□□□□□ -1.97
AP3B1O00203 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
AP3B1O00203 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
AP3B1O00203 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
AP3B1O00203 AL359693.1-201ENST00000614959 2407 ntBASIC2.72□□□□□ -1.97
AP3B1O00203 ANKRD36P1-201ENST00000344424 659 ntBASIC2.72□□□□□ -1.97
AP3B1O00203 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
AP3B1O00203 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
AP3B1O00203 ANAPC10P1-201ENST00000395991 556 ntBASIC2.72□□□□□ -1.97
AP3B1O00203 DHFRP6-201ENST00000401776 268 ntBASIC2.72□□□□□ -1.97
AP3B1O00203 RNU2-42P-201ENST00000410697 113 ntBASIC2.72□□□□□ -1.97
AP3B1O00203 ZNF863P-201ENST00000426746 417 ntBASIC2.72□□□□□ -1.97
AP3B1O00203 AL451062.2-201ENST00000427515 271 ntBASIC2.72□□□□□ -1.97
AP3B1O00203 AC112220.1-201ENST00000434628 355 ntBASIC2.72□□□□□ -1.97
AP3B1O00203 RPL36AP6-201ENST00000435770 321 ntBASIC2.72□□□□□ -1.97
AP3B1O00203 UBE2V1P13-201ENST00000436983 439 ntBASIC2.72□□□□□ -1.97
AP3B1O00203 MTND2P20-201ENST00000440805 661 ntBASIC2.72□□□□□ -1.97
AP3B1O00203 MTCYBP42-201ENST00000444653 1130 ntBASIC2.72□□□□□ -1.97
AP3B1O00203 MRPL50P4-201ENST00000446432 475 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms