Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 ART2BP-201ENST00000453501 499 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 SNORD121B-201ENST00000458838 81 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 RPS4XP13-201ENST00000483219 789 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 RPS3AP22-201ENST00000488297 769 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 AC083906.5-201ENST00000503722 328 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 AC111000.2-201ENST00000507775 550 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 AC034159.1-201ENST00000513885 583 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 SNORA64.4-201ENST00000516632 81 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 AP003497.1-201ENST00000528472 562 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 AC008015.1-201ENST00000555505 465 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 AC145350.1-201ENST00000567426 208 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 OR4K8P-201ENST00000578842 1048 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 NIFKP6-201ENST00000598115 845 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 AC068313.1-201ENST00000604028 1008 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 AC097468.3-201ENST00000607956 456 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 AL590099.1-201ENST00000615276 138 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 AC091304.6-201ENST00000619761 202 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 AC002550.2-201ENST00000621246 394 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 AC079416.3-201ENST00000624479 549 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 AL672167.1-206ENST00000356293 943 ntBASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 MIR148B-201ENST00000362252 99 ntBASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 RNU6-500P-201ENST00000362349 107 ntBASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 U3.11-201ENST00000364476 212 ntBASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 Y_RNA.302-201ENST00000364997 102 ntBASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 BEND7P1-201ENST00000422058 457 ntBASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 MTND5P25-201ENST00000430499 799 ntBASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 UBE2FP3-201ENST00000436366 524 ntBASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 HMGN2P20-201ENST00000437531 273 ntBASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 AL133217.1-201ENST00000450980 425 ntBASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 VN1R17P-201ENST00000472048 1090 ntBASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 AC104563.1-201ENST00000476147 376 ntBASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 AC108860.1-201ENST00000484521 383 ntBASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 AC004062.1-201ENST00000509926 645 ntBASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 OR5G4P-201ENST00000525251 760 ntBASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 MTND3P12-201ENST00000559068 328 ntBASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 AL031176.1-201ENST00000604554 466 ntBASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 AC072039.2-201ENST00000608883 439 ntBASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 AL355810.1-201ENST00000614629 552 ntBASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 AL590240.3-201ENST00000621416 943 ntBASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 AL360181.4-201ENST00000621752 134 ntBASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NEDD8-MDP1E9PL57 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 SNORD56.3-201ENST00000363507 71 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 RNU6-1207P-201ENST00000384343 107 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 RNU6-253P-201ENST00000384730 105 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 AL049545.1-201ENST00000401856 572 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 MIR320C1-201ENST00000408566 88 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 NDUFB4P5-201ENST00000415445 361 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 AL135938.1-201ENST00000443141 297 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 OR6K5P-201ENST00000447050 945 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 AP000542.1-201ENST00000448473 371 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 AC104308.1-201ENST00000454621 333 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 snoU13.8-201ENST00000458890 104 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 snoU13.4-201ENST00000458916 104 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms