Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 NIFKP6-201ENST00000598115 845 ntBASIC2.68□□□□□ -1.98
TRIM49D1C9J1S8 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.68□□□□□ -1.98
TRIM49D1C9J1S8 AC106791.2-201ENST00000604680 391 ntBASIC2.68□□□□□ -1.98
TRIM49D1C9J1S8 AC024560.3-201ENST00000608482 349 ntBASIC2.68□□□□□ -1.98
TRIM49D1C9J1S8 VIS1.1-201ENST00000610517 203 ntBASIC2.68□□□□□ -1.98
TRIM49D1C9J1S8 MIR3670-4-201ENST00000612260 65 ntBASIC2.68□□□□□ -1.98
TRIM49D1C9J1S8 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.68□□□□□ -1.98
TRIM49D1C9J1S8 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.68□□□□□ -1.98
TRIM49D1C9J1S8 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TRIM49D1C9J1S8 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.68□□□□□ -1.98
TRIM49D1C9J1S8 AL022578.1-201ENST00000439330 1433 ntBASIC2.68□□□□□ -1.98
TRIM49D1C9J1S8 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 MTND4P16-201ENST00000466108 1367 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 SNORA18.3-201ENST00000384122 132 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 AL023807.1-201ENST00000407932 359 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 RNU4-72P-201ENST00000410754 173 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 RNU4-78P-201ENST00000410940 126 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 Z92545.1-201ENST00000411782 234 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 AL592148.1-201ENST00000413568 445 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 EEF1A1P41-201ENST00000414667 207 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 AC098592.1-201ENST00000419352 333 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 YPEL5P1-201ENST00000419731 367 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 MTND2P18-201ENST00000419962 1030 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 AC096632.1-201ENST00000427395 310 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 MTND5P25-201ENST00000430499 799 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 AL354941.1-201ENST00000438600 464 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 RPL17P49-201ENST00000443728 411 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 RSL24D1P3-201ENST00000449255 495 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 RPS27AP8-201ENST00000452665 445 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 RNU7-136P-201ENST00000458819 69 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 AC093767.1-201ENST00000504523 156 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 SNORA3.4-201ENST00000515969 96 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 DEFB131D-201ENST00000526803 184 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 AC123904.3-201ENST00000547218 814 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 MIR4325-201ENST00000583049 90 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 AL356575.1-201ENST00000603008 283 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 AL160281.1-201ENST00000605307 311 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 AC112220.3-201ENST00000605502 502 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 AC093783.1-201ENST00000612976 329 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 AC243773.3-201ENST00000613270 256 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 AC048344.4-201ENST00000619744 527 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 AC040168.1-201ENST00000623594 991 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 MTCO1P23-201ENST00000415223 1526 ntBASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TRIM49D1C9J1S8 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 RNU6-50P-201ENST00000362356 103 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 RNU6-931P-201ENST00000363850 107 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 RNU6-730P-201ENST00000383954 104 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 RNU6-629P-201ENST00000384061 103 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 RNU6-952P-201ENST00000391164 108 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 RNU1-101P-201ENST00000391171 127 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 RPL17P50-201ENST00000396131 546 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 AC119751.3-201ENST00000399720 670 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 SSXP10-201ENST00000402595 565 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 AL138827.1-201ENST00000402666 306 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 RNU4-65P-201ENST00000410473 140 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 AC107081.1-201ENST00000414975 361 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 HSPE1P1-201ENST00000421494 318 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 AC091390.3-201ENST00000426478 338 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 AL139132.1-201ENST00000431587 344 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 MTND2P20-201ENST00000440805 661 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 RPL23AP16-201ENST00000441715 421 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 MTND2P22-201ENST00000444325 1033 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 RPS26P56-201ENST00000444468 240 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 EPS15P1-201ENST00000448836 336 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 AC098826.2-201ENST00000452011 651 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 BX322784.1-201ENST00000455793 1077 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 AP001992.1-205ENST00000462248 379 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 RPL30P9-201ENST00000465586 330 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 AC010301.1-201ENST00000473936 355 ntBASIC2.66□□□□□ -1.98
TRIM49D1C9J1S8 OR5H5P-201ENST00000503164 928 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms