Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 MIR126-201ENST00000362291 85 ntBASIC0.96□□□□□ -2.26
LINC01549A6NIU2 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC0.96□□□□□ -2.26
LINC01549A6NIU2 FCF1P2-201ENST00000415284 583 ntBASIC0.96□□□□□ -2.26
LINC01549A6NIU2 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
LINC01549A6NIU2 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.96□□□□□ -2.26
LINC01549A6NIU2 HMGB1P49-201ENST00000418882 569 ntBASIC0.96□□□□□ -2.26
LINC01549A6NIU2 AIMP1P2-201ENST00000425294 312 ntBASIC0.96□□□□□ -2.26
LINC01549A6NIU2 RPL7P36-201ENST00000444633 681 ntBASIC0.96□□□□□ -2.26
LINC01549A6NIU2 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.96□□□□□ -2.26
LINC01549A6NIU2 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC0.96□□□□□ -2.26
LINC01549A6NIU2 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC0.96□□□□□ -2.26
LINC01549A6NIU2 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC0.96□□□□□ -2.26
LINC01549A6NIU2 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC0.96□□□□□ -2.26
LINC01549A6NIU2 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC0.96□□□□□ -2.26
LINC01549A6NIU2 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.96□□□□□ -2.26
LINC01549A6NIU2 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC0.96□□□□□ -2.26
LINC01549A6NIU2 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC0.96□□□□□ -2.26
LINC01549A6NIU2 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC0.96□□□□□ -2.26
LINC01549A6NIU2 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC0.96□□□□□ -2.26
LINC01549A6NIU2 AL355812.1-201ENST00000603215 216 ntBASIC0.96□□□□□ -2.26
LINC01549A6NIU2 AL161722.3-201ENST00000605789 2983 ntBASIC0.96□□□□□ -2.26
LINC01549A6NIU2 AC135507.1-201ENST00000607214 561 ntBASIC0.96□□□□□ -2.26
LINC01549A6NIU2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.96□□□□□ -2.26
LINC01549A6NIU2 AC010872.1-201ENST00000624225 675 ntBASIC0.96□□□□□ -2.26
LINC01549A6NIU2 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC0.96□□□□□ -2.26
LINC01549A6NIU2 SDAD1P2-201ENST00000441308 2028 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 MT-TP-201ENST00000387461 68 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 SNORA40.18-201ENST00000391200 128 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
LINC01549A6NIU2 SFR1P1-201ENST00000403720 688 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 MORN2-203ENST00000409131 544 ntTSL 5 BASIC0.95□□□□□ -2.26
LINC01549A6NIU2 VN1R36P-201ENST00000414936 291 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 MTND4P11-201ENST00000417020 1058 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 RPS3AP9-201ENST00000417027 792 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 BTF3P9-201ENST00000418784 283 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC0.95□□□□□ -2.26
LINC01549A6NIU2 SLC44A3-AS1-205ENST00000424505 612 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 AL451062.2-201ENST00000427515 271 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 AL354695.1-201ENST00000427935 228 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
LINC01549A6NIU2 AC010881.1-201ENST00000433830 235 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 AC090774.1-201ENST00000435925 246 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 AC124916.1-201ENST00000444020 547 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC0.95□□□□□ -2.26
LINC01549A6NIU2 SNRPGP6-201ENST00000451124 220 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 SSXP1-201ENST00000453640 473 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.95□□□□□ -2.26
LINC01549A6NIU2 RPS15AP36-201ENST00000492022 382 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.95□□□□□ -2.26
LINC01549A6NIU2 SNORA25.15-201ENST00000516487 89 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 SNORA31.13-201ENST00000516624 135 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC0.95□□□□□ -2.26
LINC01549A6NIU2 AP000867.2-201ENST00000532468 320 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
LINC01549A6NIU2 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.95□□□□□ -2.26
LINC01549A6NIU2 MIR4648-201ENST00000580107 72 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
LINC01549A6NIU2 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.95□□□□□ -2.26
LINC01549A6NIU2 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC0.95□□□□□ -2.26
LINC01549A6NIU2 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC0.95□□□□□ -2.26
LINC01549A6NIU2 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC0.95□□□□□ -2.26
LINC01549A6NIU2 MIR92B-201ENST00000607575 96 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 AC091834.1-201ENST00000614543 472 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 AC021755.4-201ENST00000616620 456 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 UCA1.1-201ENST00000620952 75 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 AC068620.4-201ENST00000636730 1182 ntBASIC0.95□□□□□ -2.26
LINC01549A6NIU2 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC0.95□□□□□ -2.26
LINC01549A6NIU2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC0.95□□□□□ -2.26
LINC01549A6NIU2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC0.94□□□□□ -2.26
LINC01549A6NIU2 DDX10P1-201ENST00000448545 1933 ntBASIC0.94□□□□□ -2.26
LINC01549A6NIU2 LSM5-205ENST00000409952 687 ntTSL 4 BASIC0.94□□□□□ -2.26
LINC01549A6NIU2 LSM5-206ENST00000409987 504 ntTSL 5 BASIC0.94□□□□□ -2.26
LINC01549A6NIU2 RNA5SP270-201ENST00000411361 118 ntBASIC0.94□□□□□ -2.26
LINC01549A6NIU2 MTCYBP24-201ENST00000420387 1106 ntBASIC0.94□□□□□ -2.26
LINC01549A6NIU2 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC0.94□□□□□ -2.26
LINC01549A6NIU2 CALM1P2-201ENST00000452941 448 ntBASIC0.94□□□□□ -2.26
LINC01549A6NIU2 NAP1L1P3-201ENST00000462291 880 ntBASIC0.94□□□□□ -2.26
LINC01549A6NIU2 RPL31P58-201ENST00000469001 379 ntBASIC0.94□□□□□ -2.26
LINC01549A6NIU2 SYPL1P1-201ENST00000473622 768 ntBASIC0.94□□□□□ -2.26
LINC01549A6NIU2 AC072039.1-201ENST00000477611 581 ntBASIC0.94□□□□□ -2.26
LINC01549A6NIU2 RPS27P26-201ENST00000494583 239 ntBASIC0.94□□□□□ -2.26
LINC01549A6NIU2 AP001960.1-201ENST00000506494 658 ntBASIC0.94□□□□□ -2.26
LINC01549A6NIU2 AC008885.2-201ENST00000509506 930 ntBASIC0.94□□□□□ -2.26
LINC01549A6NIU2 AC109464.2-201ENST00000510242 943 ntBASIC0.94□□□□□ -2.26
LINC01549A6NIU2 AC010486.1-201ENST00000511793 424 ntBASIC0.94□□□□□ -2.26
LINC01549A6NIU2 SNORA31.20-201ENST00000517111 133 ntBASIC0.94□□□□□ -2.26
LINC01549A6NIU2 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.94□□□□□ -2.26
LINC01549A6NIU2 AP004247.1-201ENST00000531556 1289 ntBASIC0.94□□□□□ -2.26
LINC01549A6NIU2 OR5AL2P-201ENST00000532185 920 ntBASIC0.94□□□□□ -2.26
LINC01549A6NIU2 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC0.94□□□□□ -2.26
LINC01549A6NIU2 MIR3683-201ENST00000580847 82 ntBASIC0.94□□□□□ -2.26
LINC01549A6NIU2 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC0.94□□□□□ -2.26
LINC01549A6NIU2 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.94□□□□□ -2.26
LINC01549A6NIU2 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC0.94□□□□□ -2.26
LINC01549A6NIU2 AL022578.1-201ENST00000439330 1433 ntBASIC0.94□□□□□ -2.26
LINC01549A6NIU2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
LINC01549A6NIU2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
LINC01549A6NIU2 AL356131.1-201ENST00000405826 414 ntBASIC0.93□□□□□ -2.26
LINC01549A6NIU2 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC0.93□□□□□ -2.26
LINC01549A6NIU2 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms