Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AC098592.1-201ENST00000419352 333 ntBASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 AC016907.1-201ENST00000419483 435 ntBASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 AL512649.1-201ENST00000428997 581 ntBASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 AL590664.1-201ENST00000448065 339 ntBASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 TRGVB-201ENST00000453257 471 ntBASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 SUMO2P2-201ENST00000456482 255 ntBASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 AC092185.1-201ENST00000491371 97 ntBASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 AC024224.1-201ENST00000538284 609 ntBASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 AC125611.1-201ENST00000549563 229 ntBASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 TRAV37-201ENST00000553906 342 ntBASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 AC010620.1-201ENST00000601088 1102 ntBASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 ZNF833P-201ENST00000424938 1494 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 SNRPEP3-201ENST00000338402 276 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 SNORA4.1-201ENST00000364263 144 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 RNU6-621P-201ENST00000364752 109 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 Y_RNA.311-201ENST00000365068 96 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 MIR128-1-201ENST00000384921 82 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 MIR493-201ENST00000385254 89 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 RNU6-882P-201ENST00000391025 103 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 NDUFB4P4-201ENST00000404822 243 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 RNA5SP38-201ENST00000410750 119 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 AL365338.1-201ENST00000422282 858 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 EZH2P1-201ENST00000431167 291 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 AL354941.1-201ENST00000438600 464 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 AC092427.1-201ENST00000439177 601 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 EEF1E1P1-201ENST00000446998 430 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 RPL39P6-201ENST00000448289 150 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 VN1R104P-201ENST00000505115 1009 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 AC111000.2-201ENST00000507775 550 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 AC109445.1-201ENST00000512356 383 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 AC105185.1-201ENST00000518705 535 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 FAM60DP-201ENST00000524174 632 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 SLC2A13P1-201ENST00000531560 322 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 MIR4999-201ENST00000585029 91 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 Z99497.2-201ENST00000603634 310 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 AC080013.4-201ENST00000607624 649 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 AL136981.2-201ENST00000617319 734 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 AC007494.3-201ENST00000624660 743 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 AC091965.5-201ENST00000624785 342 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 MIR3974-201ENST00000637126 96 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 CRYM-AS1-204ENST00000637983 556 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 TAB3P1-202ENST00000452645 1634 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 AL079305.1-201ENST00000623159 3008 ntBASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TRIM49BA6NDI0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 RNU6-553P-201ENST00000364047 96 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 RNU6-777P-201ENST00000364265 104 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 RNU6-660P-201ENST00000364566 109 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 SNORA9.2-201ENST00000365361 133 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 Y_RNA.560-201ENST00000384689 102 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 AL590004.2-201ENST00000404787 371 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 RNU2-47P-201ENST00000410649 186 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 BMS1P22-201ENST00000414726 313 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 BEND7P1-201ENST00000422058 457 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 AL022400.1-201ENST00000423946 935 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 VN1R108P-201ENST00000431580 830 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 THAP5P1-201ENST00000439089 262 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 UBE2D3P4-201ENST00000441973 436 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 Z83846.1-201ENST00000446798 265 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 AL671855.1-201ENST00000446875 1203 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms