Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 RNU6-859P-201ENST00000362728 107 ntBASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 SET-203ENST00000372688 801 ntTSL 2 BASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 MIR135A2-201ENST00000384854 100 ntBASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 UBE2V1P2-201ENST00000397758 440 ntBASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 AL139039.1-201ENST00000401900 692 ntBASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 RNU2-28P-201ENST00000410457 189 ntBASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 RNU6-575P-201ENST00000411326 105 ntBASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 MTCO3P1-205ENST00000422088 832 ntBASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 RAC1P8-201ENST00000427086 527 ntBASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 RNF2P1-201ENST00000442955 1010 ntBASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 AC104389.3-201ENST00000445629 235 ntBASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 AC013828.1-201ENST00000481845 158 ntBASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 GZMAP1-201ENST00000503054 631 ntBASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 RNU6-798P-201ENST00000516912 103 ntBASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 RNA5SP471-201ENST00000516971 106 ntBASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 AC090888.1-201ENST00000561335 1141 ntBASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 VN1R78P-201ENST00000597393 564 ntBASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 AL671309.1-201ENST00000603750 544 ntBASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 AC007619.2-201ENST00000605743 379 ntBASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 AC020658.4-201ENST00000613987 684 ntBASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 AC026634.1-201ENST00000634369 198 ntBASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 AC008669.1-201ENST00000565823 2178 ntBASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 AC010680.1-201ENST00000590024 3590 ntBASIC2.33□□□□□ -2.04
USH1CQ9Y6N9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 ANKRD36P1-201ENST00000344424 659 ntBASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 AC007064.1-201ENST00000412238 351 ntBASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 MTND1P23-201ENST00000416931 372 ntBASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 AC000041.1-201ENST00000439655 175 ntBASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 AP000936.2-201ENST00000447151 681 ntBASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 RPL36AP51-201ENST00000487216 318 ntBASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 RPS27P26-201ENST00000494583 239 ntBASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 RPL30P5-201ENST00000494923 336 ntBASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 RN7SKP24-201ENST00000515888 284 ntBASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 RNA5SP356-201ENST00000515972 94 ntBASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 RNA5SP320-201ENST00000516263 124 ntBASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 SNORA48.10-201ENST00000516965 160 ntBASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 SUB1P1-201ENST00000524415 382 ntBASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 MIR3921-201ENST00000577308 85 ntBASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 AC090616.3-201ENST00000582184 217 ntBASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 AC025588.4-201ENST00000615802 908 ntBASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 AL445493.3-201ENST00000619568 477 ntBASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 AC090772.4-201ENST00000623599 362 ntBASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 AP003485.2-201ENST00000623636 610 ntBASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 AC080188.3-201ENST00000624842 748 ntBASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
USH1CQ9Y6N9 RNU1-105P-201ENST00000363470 161 ntBASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 U6.112-201ENST00000384129 70 ntBASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 RNU2-43P-201ENST00000410306 190 ntBASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 BEND7P1-201ENST00000422058 457 ntBASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 DEFB130D-201ENST00000426866 237 ntBASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 AC009414.1-201ENST00000427200 443 ntBASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 FCF1P1-201ENST00000432690 571 ntBASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 LINC00888-204ENST00000487386 421 ntBASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 AC090255.1-201ENST00000495779 349 ntBASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 COX7A2P2-201ENST00000505291 250 ntBASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 AC113420.1-201ENST00000507903 571 ntBASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 AC109464.2-201ENST00000510242 943 ntBASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 RPL23AP94-201ENST00000512518 302 ntBASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 RNU6-928P-201ENST00000516876 104 ntBASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 COX6CP8-201ENST00000522620 226 ntBASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 AC025281.1-201ENST00000567026 265 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms