Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 RNU5E-1-201ENST00000362477 120 ntBASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 Y_RNA.481-201ENST00000384373 102 ntBASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 U3.29-201ENST00000391296 212 ntBASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 SNORA3C-201ENST00000408792 125 ntBASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 RPS12P23-201ENST00000419579 400 ntBASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 AC092832.1-201ENST00000422934 400 ntBASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 AC019097.1-201ENST00000424783 735 ntBASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 MTCO2P19-201ENST00000427513 598 ntBASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 RPL23AP20-201ENST00000447965 421 ntBASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 NFU1P2-201ENST00000448700 469 ntBASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 AL353691.1-201ENST00000451332 387 ntBASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 AC104308.1-201ENST00000454621 333 ntBASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 CEACAMP4-201ENST00000457676 421 ntBASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 AC006517.1-201ENST00000480485 328 ntBASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 AC055855.1-201ENST00000489563 579 ntBASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 RPL7P47-201ENST00000497299 556 ntBASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 HMGN1P11-201ENST00000508668 303 ntBASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 AP003497.1-201ENST00000528472 562 ntBASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 AL512360.1-201ENST00000555346 234 ntBASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 AP005205.1-201ENST00000563503 508 ntBASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 AC104662.1-201ENST00000604448 511 ntBASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 MIR486-1-201ENST00000612171 68 ntBASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 HSPA8P1-201ENST00000425843 1833 ntBASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 BDP1P-201ENST00000582658 1990 ntBASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.2□□□□□ -1.74
SSX2IPQ9Y2D8 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 RNA5SP119-201ENST00000362715 117 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 SNORD46.1-201ENST00000364139 104 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 RNY1P12-201ENST00000364251 105 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 SNORA20.2-201ENST00000383922 131 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 Y_RNA.390-201ENST00000383932 102 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 MT-TC-201ENST00000387405 66 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 FGF7P8-201ENST00000402994 292 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 RAP1BP3-201ENST00000407180 549 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 USP9YP27-201ENST00000418455 438 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 YME1L1P1-201ENST00000429435 297 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 AL662791.1-201ENST00000441992 928 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 NANOGP10-201ENST00000453325 895 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 MTND1P9-201ENST00000453775 944 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 SNORD121B-201ENST00000458838 81 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 RNU7-170P-201ENST00000459303 61 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 RPL23AP62-201ENST00000463396 453 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 RPL37P6-202ENST00000464216 403 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 MTCO2P29-201ENST00000465212 189 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 AC079382.1-201ENST00000493346 557 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 AP001086.1-201ENST00000494882 321 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 RNU1-95P-201ENST00000516357 160 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 Y_RNA.693-201ENST00000516641 110 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 RNU1-128P-201ENST00000516704 160 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 RNU6-528P-201ENST00000516926 100 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 AC026403.1-201ENST00000518938 295 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 AC107934.1-201ENST00000522215 217 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 AK6P1-201ENST00000540219 478 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 AC025678.1-201ENST00000567861 338 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 AC019176.2-201ENST00000611579 315 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 AC064801.1-201ENST00000612025 407 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 AC012150.2-201ENST00000621300 544 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 AC244100.1-202ENST00000621554 382 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 AC139792.3-201ENST00000623525 224 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 MIR1321-201ENST00000637766 79 ntBASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SSX2IPQ9Y2D8 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms