Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 OR5P1P-201ENST00000299512 925 ntBASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 RNU6-434P-201ENST00000384376 107 ntBASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 RNU6-328P-201ENST00000390887 106 ntBASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 RPL23AP69-201ENST00000431134 458 ntBASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 AL354714.3-201ENST00000447284 493 ntBASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 PTMAP3-201ENST00000447474 330 ntBASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 CEACAMP6-201ENST00000452007 574 ntBASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 ENPP7P9-201ENST00000514456 627 ntBASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 SNORA31.3-201ENST00000516029 96 ntBASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 RNA5SP464-201ENST00000516251 108 ntBASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 RNU6-1046P-201ENST00000516538 107 ntBASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 RN7SKP92-201ENST00000517266 244 ntBASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 AC022360.1-201ENST00000521058 340 ntBASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 AL352979.3-201ENST00000553515 247 ntBASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 DNAJC8P1-201ENST00000554535 372 ntBASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 AC106782.4-201ENST00000568264 210 ntBASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 AC069061.3-201ENST00000582254 823 ntBASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 AC104763.2-201ENST00000604179 382 ntBASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 AL157817.1-201ENST00000614264 790 ntBASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 AL158196.1-201ENST00000616786 434 ntBASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 OR14L1P-202ENST00000641545 3009 ntBASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 MTND5P19-201ENST00000424872 1794 ntBASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.17□□□□□ -1.74
CDC42EP3Q9UKI2 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 AL592437.2-201ENST00000421655 2434 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 AC126323.6-202ENST00000568092 3511 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 RN7SKP153-201ENST00000365026 316 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 RNU6-715P-201ENST00000365204 103 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 RNU6-128P-201ENST00000383976 107 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 Y_RNA.459-201ENST00000384251 102 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 RNU6-463P-201ENST00000384340 107 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 RNU6-601P-201ENST00000384540 107 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 MIR153-1-201ENST00000384914 90 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 RNU2-43P-201ENST00000410306 190 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 PDSS1P1-201ENST00000422953 1114 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 AL358176.2-201ENST00000425769 204 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 RPL7P28-201ENST00000437739 740 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 MTND5P22-201ENST00000458380 195 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 RPL21P103-201ENST00000479921 488 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 AC021146.2-201ENST00000504736 556 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 AC006427.1-201ENST00000514359 712 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 RNU6-976P-201ENST00000516086 111 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 RNU6-988P-201ENST00000519081 107 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 AC134698.5-201ENST00000519444 336 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 BNIP3P5-201ENST00000562290 498 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 AC007619.2-201ENST00000605743 379 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 AL359547.2-201ENST00000615810 418 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 AL355365.1-201ENST00000616480 294 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 RMST_9.1-201ENST00000619945 193 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDC42EP3Q9UKI2 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms