Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 MAPK10-322ENST00000641485 4530 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 AL590004.2-201ENST00000404787 371 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 RNU2-42P-201ENST00000410697 113 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 XKRYP1-201ENST00000423438 492 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 PSMA6P3-201ENST00000428242 164 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 AC109583.1-201ENST00000432156 268 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 XKRYP2-201ENST00000432915 492 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 Z83846.1-201ENST00000446798 265 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 SUMO2P2-201ENST00000456482 255 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 AC026410.2-201ENST00000460281 156 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 RPS15AP17-201ENST00000470598 390 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 AC108734.3-201ENST00000481241 1165 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 AP001025.2-201ENST00000490908 477 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 AC091163.3-201ENST00000518269 1144 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 HSPA8P13-201ENST00000523715 472 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 MTATP6P15-201ENST00000527233 835 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 UBTFL10-201ENST00000528532 562 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 AC079600.2-201ENST00000550076 130 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 SETP7-201ENST00000552169 453 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 MIR4509-3-201ENST00000578671 94 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 AC008088.1-201ENST00000580993 280 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 MIR4637-201ENST00000582405 84 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 MIR4509-2-201ENST00000583920 94 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 AC069304.2-201ENST00000605154 435 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 RNU4-5P-201ENST00000607255 135 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 AC107871.2-201ENST00000612894 502 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 MIR4509-1-201ENST00000618224 94 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 AP003485.2-201ENST00000623636 610 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 AP003122.6-201ENST00000623831 495 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 ASNSP3-201ENST00000451989 1306 ntBASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 AC092447.7-201ENST00000422212 1621 ntBASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 AL161449.1-201ENST00000414531 1199 ntBASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 SAR1AP4-201ENST00000429225 591 ntBASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 AC236972.1-201ENST00000433225 199 ntBASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 AC092427.1-201ENST00000439177 601 ntBASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 OR4G11P-201ENST00000492842 939 ntBASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 AC024224.1-201ENST00000538284 609 ntBASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 AL132857.1-201ENST00000555180 708 ntBASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 VN1R83P-201ENST00000595685 445 ntBASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 AL139344.1-201ENST00000605228 195 ntBASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 AC080013.6-201ENST00000606185 215 ntBASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 AL121895.2-201ENST00000619558 447 ntBASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 AL356585.4-201ENST00000623078 1229 ntBASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 MIR1322-201ENST00000638013 71 ntBASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 CUL1P1-201ENST00000509510 2425 ntBASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.33□□□□□ -1.88
CLIP2Q9UDT6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 RPL9P7-201ENST00000330965 580 ntBASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 FAT1P1-201ENST00000406588 507 ntBASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 MTND2P5-201ENST00000432656 1006 ntBASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 UBE2DNL-203ENST00000474922 222 ntBASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms