Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.58□□□□□ -2
CTSFQ9UBX1 AC013444.2-201ENST00000603317 787 ntBASIC2.58□□□□□ -2
CTSFQ9UBX1 AC090115.4-201ENST00000609970 188 ntBASIC2.58□□□□□ -2
CTSFQ9UBX1 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.58□□□□□ -2
CTSFQ9UBX1 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.58□□□□□ -2
CTSFQ9UBX1 AC084824.4-201ENST00000620106 731 ntBASIC2.58□□□□□ -2
CTSFQ9UBX1 AL356585.4-201ENST00000623078 1229 ntBASIC2.58□□□□□ -2
CTSFQ9UBX1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.58□□□□□ -2
CTSFQ9UBX1 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CTSFQ9UBX1 ASNSP3-201ENST00000451989 1306 ntBASIC2.58□□□□□ -2
CTSFQ9UBX1 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.58□□□□□ -2
CTSFQ9UBX1 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CTSFQ9UBX1 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.57□□□□□ -2
CTSFQ9UBX1 RPL9P7-201ENST00000330965 580 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 FTLP6-201ENST00000355274 422 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 RNU6-859P-201ENST00000362728 107 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 snoZ40.1-201ENST00000364540 72 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 MIR34A-201ENST00000385130 110 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 MIR9-1-201ENST00000385198 89 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 Y_RNA.578-201ENST00000390903 88 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.57□□□□□ -2
CTSFQ9UBX1 RNU2-42P-201ENST00000410697 113 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.57□□□□□ -2
CTSFQ9UBX1 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.57□□□□□ -2
CTSFQ9UBX1 PSMA6P3-201ENST00000428242 164 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 GTF2IP3-201ENST00000433887 494 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 AC092573.2-201ENST00000434546 243 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.57□□□□□ -2
CTSFQ9UBX1 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.57□□□□□ -2
CTSFQ9UBX1 AC009961.3-201ENST00000449832 765 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 AL049714.1-201ENST00000466686 347 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 RPL23AP70-201ENST00000483361 460 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 RN7SL432P-201ENST00000484057 298 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 RPS27P26-201ENST00000494583 239 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.57□□□□□ -2
CTSFQ9UBX1 CDC42P4-201ENST00000510507 563 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 AC008716.1-201ENST00000511084 513 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 CASP1P1-201ENST00000526345 212 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.57□□□□□ -2
CTSFQ9UBX1 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.57□□□□□ -2
CTSFQ9UBX1 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.57□□□□□ -2
CTSFQ9UBX1 ACTR3BP3-201ENST00000565577 979 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.57□□□□□ -2
CTSFQ9UBX1 MIR3670-2-201ENST00000582974 65 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 MIR3670-1-201ENST00000584160 65 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 MIR3670-3-201ENST00000584855 65 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 DNAJC19P3-201ENST00000594491 331 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 MIR3670-4-201ENST00000612260 65 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 AC034102.8-201ENST00000615146 484 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 AC004808.1-201ENST00000627671 721 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 U6.101-201ENST00000637707 76 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.57□□□□□ -2
CTSFQ9UBX1 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.57□□□□□ -2
CTSFQ9UBX1 Z99496.1-201ENST00000469424 1477 ntBASIC2.57□□□□□ -2
CTSFQ9UBX1 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.56□□□□□ -2
CTSFQ9UBX1 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CTSFQ9UBX1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.56□□□□□ -2
CTSFQ9UBX1 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.56□□□□□ -2
CTSFQ9UBX1 SNRPEP3-201ENST00000338402 276 ntBASIC2.56□□□□□ -2
CTSFQ9UBX1 RNU6-224P-201ENST00000384055 107 ntBASIC2.56□□□□□ -2
CTSFQ9UBX1 SNORA40.2-201ENST00000390847 128 ntBASIC2.56□□□□□ -2
CTSFQ9UBX1 AL031679.1-201ENST00000400616 525 ntBASIC2.56□□□□□ -2
CTSFQ9UBX1 DPRXP1-201ENST00000426312 460 ntBASIC2.56□□□□□ -2
CTSFQ9UBX1 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.56□□□□□ -2
CTSFQ9UBX1 AL592447.1-201ENST00000447592 540 ntBASIC2.56□□□□□ -2
CTSFQ9UBX1 USP9YP34-201ENST00000453983 808 ntBASIC2.56□□□□□ -2
CTSFQ9UBX1 RFC5P1-201ENST00000454419 874 ntBASIC2.56□□□□□ -2
CTSFQ9UBX1 Z82190.1-201ENST00000454534 490 ntBASIC2.56□□□□□ -2
CTSFQ9UBX1 AP000705.1-201ENST00000454567 350 ntBASIC2.56□□□□□ -2
CTSFQ9UBX1 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.56□□□□□ -2
CTSFQ9UBX1 snoU13.28-201ENST00000459235 104 ntBASIC2.56□□□□□ -2
CTSFQ9UBX1 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.56□□□□□ -2
CTSFQ9UBX1 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.56□□□□□ -2
CTSFQ9UBX1 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.56□□□□□ -2
CTSFQ9UBX1 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.56□□□□□ -2
CTSFQ9UBX1 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.56□□□□□ -2
CTSFQ9UBX1 AC087276.1-201ENST00000529659 480 ntBASIC2.56□□□□□ -2
CTSFQ9UBX1 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.56□□□□□ -2
CTSFQ9UBX1 ELOCP31-201ENST00000540463 467 ntBASIC2.56□□□□□ -2
CTSFQ9UBX1 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.56□□□□□ -2
CTSFQ9UBX1 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.56□□□□□ -2
CTSFQ9UBX1 AC125611.1-201ENST00000549563 229 ntBASIC2.56□□□□□ -2
CTSFQ9UBX1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.56□□□□□ -2
CTSFQ9UBX1 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.56□□□□□ -2
CTSFQ9UBX1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.56□□□□□ -2
CTSFQ9UBX1 NRBF2P5-201ENST00000603087 788 ntBASIC2.56□□□□□ -2
CTSFQ9UBX1 AC112220.2-201ENST00000605513 533 ntBASIC2.56□□□□□ -2
CTSFQ9UBX1 RNU6-1192P-201ENST00000612197 107 ntBASIC2.56□□□□□ -2
CTSFQ9UBX1 AC023158.2-201ENST00000614876 543 ntBASIC2.56□□□□□ -2
CTSFQ9UBX1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.56□□□□□ -2
CTSFQ9UBX1 RNU6-489P-201ENST00000618289 107 ntBASIC2.56□□□□□ -2
CTSFQ9UBX1 AC123767.1-202ENST00000620407 817 ntBASIC2.56□□□□□ -2
CTSFQ9UBX1 AP003485.1-201ENST00000625093 753 ntBASIC2.56□□□□□ -2
CTSFQ9UBX1 AC109315.1-201ENST00000584143 1347 ntBASIC2.56□□□□□ -2
CTSFQ9UBX1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.56□□□□□ -2
CTSFQ9UBX1 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CTSFQ9UBX1 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.55□□□□□ -2
CTSFQ9UBX1 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms