Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 AC006971.1-201ENST00000407916 4486 ntBASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 AP001350.1-201ENST00000601906 1524 ntBASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 Y_RNA.162-201ENST00000363683 102 ntBASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 Y_RNA.414-201ENST00000384011 101 ntBASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 SNORA24.1-201ENST00000384401 135 ntBASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 RPEP3-201ENST00000425462 676 ntBASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 CKS1BP5-201ENST00000434172 273 ntBASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 AL162389.1-201ENST00000449233 177 ntBASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 AC012671.1-201ENST00000451912 203 ntBASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 AC108022.1-201ENST00000493466 478 ntBASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 AC108145.1-201ENST00000503770 153 ntBASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 AC026801.2-201ENST00000515352 425 ntBASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 RNA5SP497-201ENST00000516081 97 ntBASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 RNU6-864P-201ENST00000516256 108 ntBASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 AC026464.5-201ENST00000562497 722 ntBASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 RPL7P50-201ENST00000600588 727 ntBASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 AL390240.1-201ENST00000612950 384 ntBASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 TUG1_2.1-201ENST00000614234 87 ntBASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 U73479.1-201ENST00000618062 168 ntBASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.64□□□□□ -1.67
PPARGC1AQ9UBK2 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 API5P2-201ENST00000397055 1498 ntBASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 RNA5SP151-201ENST00000365632 117 ntBASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 Y_RNA.419-201ENST00000384041 102 ntBASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 RN7SKP177-201ENST00000410567 355 ntBASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 AC092447.6-201ENST00000414578 210 ntBASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 RPL7AP25-201ENST00000423357 805 ntBASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 RAC1P6-201ENST00000423911 575 ntBASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 RPS12P10-201ENST00000427031 377 ntBASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 MTCO3P45-201ENST00000443036 613 ntBASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 AL162395.1-201ENST00000457882 422 ntBASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 SNORD19B-201ENST00000459623 84 ntBASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 TRBVA-201ENST00000498804 316 ntBASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 AC098591.2-201ENST00000510152 315 ntBASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 MIR4715-201ENST00000584117 79 ntBASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 AC005255.1-201ENST00000593748 216 ntBASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 AC020910.2-201ENST00000603635 610 ntBASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 AL357559.1-201ENST00000622228 274 ntBASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 AC091905.2-201ENST00000623143 306 ntBASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 AC006065.5-201ENST00000623427 349 ntBASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 AC139769.1-204ENST00000472297 1931 ntBASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PPARGC1AQ9UBK2 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.62□□□□□ -1.67
PPARGC1AQ9UBK2 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PPARGC1AQ9UBK2 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PPARGC1AQ9UBK2 TPTE2P4-201ENST00000258589 1605 ntBASIC4.62□□□□□ -1.67
PPARGC1AQ9UBK2 RNU6-1287P-201ENST00000362914 107 ntBASIC4.62□□□□□ -1.67
PPARGC1AQ9UBK2 Y_RNA.373-201ENST00000365600 103 ntBASIC4.62□□□□□ -1.67
PPARGC1AQ9UBK2 RNU6-1060P-201ENST00000384664 107 ntBASIC4.62□□□□□ -1.67
PPARGC1AQ9UBK2 Y_RNA.576-201ENST00000384781 102 ntBASIC4.62□□□□□ -1.67
PPARGC1AQ9UBK2 RNU6-837P-201ENST00000391056 108 ntBASIC4.62□□□□□ -1.67
PPARGC1AQ9UBK2 SOD2P1-201ENST00000396543 562 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms