Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 OR5BE1P-202ENST00000641168 1176 ntBASIC3.82□□□□□ -1.8
LRFN1Q9P244 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
LRFN1Q9P244 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LRFN1Q9P244 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
LRFN1Q9P244 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.82□□□□□ -1.8
LRFN1Q9P244 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.82□□□□□ -1.8
LRFN1Q9P244 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.82□□□□□ -1.8
LRFN1Q9P244 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
LRFN1Q9P244 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.81□□□□□ -1.8
LRFN1Q9P244 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRFN1Q9P244 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
LRFN1Q9P244 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LRFN1Q9P244 RNA5SP52-201ENST00000362448 134 ntBASIC3.81□□□□□ -1.8
LRFN1Q9P244 RNU6-960P-201ENST00000364056 120 ntBASIC3.81□□□□□ -1.8
LRFN1Q9P244 RHOT1P2-201ENST00000366423 333 ntBASIC3.81□□□□□ -1.8
LRFN1Q9P244 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.81□□□□□ -1.8
LRFN1Q9P244 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
LRFN1Q9P244 RNU6-259P-201ENST00000383999 107 ntBASIC3.81□□□□□ -1.8
LRFN1Q9P244 RNU6-1197P-201ENST00000391183 107 ntBASIC3.81□□□□□ -1.8
LRFN1Q9P244 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.81□□□□□ -1.8
LRFN1Q9P244 NDUFS5P1-201ENST00000405668 289 ntBASIC3.81□□□□□ -1.8
LRFN1Q9P244 Y_RNA.619-201ENST00000410951 90 ntBASIC3.81□□□□□ -1.8
LRFN1Q9P244 Z85995.1-201ENST00000415547 335 ntBASIC3.81□□□□□ -1.8
LRFN1Q9P244 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.81□□□□□ -1.8
LRFN1Q9P244 AC245054.1-201ENST00000420944 258 ntBASIC3.81□□□□□ -1.8
LRFN1Q9P244 RAC1P6-201ENST00000423911 575 ntBASIC3.81□□□□□ -1.8
LRFN1Q9P244 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.81□□□□□ -1.8
LRFN1Q9P244 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.81□□□□□ -1.8
LRFN1Q9P244 DNAJC19P4-201ENST00000440115 345 ntBASIC3.81□□□□□ -1.8
LRFN1Q9P244 CBWD4P-201ENST00000445695 655 ntBASIC3.81□□□□□ -1.8
LRFN1Q9P244 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.81□□□□□ -1.8
LRFN1Q9P244 VN1R34P-201ENST00000447387 883 ntBASIC3.81□□□□□ -1.8
LRFN1Q9P244 AL451050.1-201ENST00000450126 415 ntBASIC3.81□□□□□ -1.8
LRFN1Q9P244 RPS20P22-201ENST00000473700 357 ntBASIC3.81□□□□□ -1.8
LRFN1Q9P244 AL358832.1-201ENST00000497800 389 ntBASIC3.81□□□□□ -1.8
LRFN1Q9P244 UBE2CP3-201ENST00000502715 450 ntBASIC3.81□□□□□ -1.8
LRFN1Q9P244 RPL37P25-201ENST00000507308 276 ntBASIC3.81□□□□□ -1.8
LRFN1Q9P244 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.81□□□□□ -1.8
LRFN1Q9P244 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.81□□□□□ -1.8
LRFN1Q9P244 SNORA31.3-201ENST00000516029 96 ntBASIC3.81□□□□□ -1.8
LRFN1Q9P244 RNU6-1220P-201ENST00000517126 108 ntBASIC3.81□□□□□ -1.8
LRFN1Q9P244 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
LRFN1Q9P244 DUXAP2-201ENST00000519198 589 ntBASIC3.81□□□□□ -1.8
LRFN1Q9P244 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.81□□□□□ -1.8
LRFN1Q9P244 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.81□□□□□ -1.8
LRFN1Q9P244 AC245505.1-201ENST00000556398 224 ntBASIC3.81□□□□□ -1.8
LRFN1Q9P244 AC012417.1-201ENST00000582307 1039 ntBASIC3.81□□□□□ -1.8
LRFN1Q9P244 AC068880.5-201ENST00000624331 290 ntBASIC3.81□□□□□ -1.8
LRFN1Q9P244 AL359740.1-201ENST00000624340 592 ntBASIC3.81□□□□□ -1.8
LRFN1Q9P244 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRFN1Q9P244 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRFN1Q9P244 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRFN1Q9P244 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LRFN1Q9P244 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.81□□□□□ -1.8
LRFN1Q9P244 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.81□□□□□ -1.8
LRFN1Q9P244 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRFN1Q9P244 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRFN1Q9P244 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
LRFN1Q9P244 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
LRFN1Q9P244 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LRFN1Q9P244 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
LRFN1Q9P244 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRFN1Q9P244 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRFN1Q9P244 MTND5P29-201ENST00000458676 1807 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 RNU6-39P-201ENST00000384344 107 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 MIR558-201ENST00000384920 94 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 RNU6-648P-201ENST00000410190 107 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.8□□□□□ -1.8
LRFN1Q9P244 RPS3AP44-201ENST00000425466 790 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 AC091390.3-201ENST00000426478 338 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 MED13P1-201ENST00000428342 171 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 AL358934.1-201ENST00000432346 324 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.8□□□□□ -1.8
LRFN1Q9P244 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.8□□□□□ -1.8
LRFN1Q9P244 AC009237.8-201ENST00000445492 379 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 MTCYBP1-201ENST00000454315 1119 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 MTCO3P20-201ENST00000454926 688 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 C1DP4-201ENST00000455429 424 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.8□□□□□ -1.8
LRFN1Q9P244 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.8□□□□□ -1.8
LRFN1Q9P244 snoU13.22-201ENST00000459428 104 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 PPIAP15-201ENST00000479662 484 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 VN1R105P-201ENST00000486595 910 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 RPL30P5-201ENST00000494923 336 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.8□□□□□ -1.8
LRFN1Q9P244 RNU6-927P-201ENST00000516199 100 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 RNA5SP143-201ENST00000516936 115 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.8□□□□□ -1.8
LRFN1Q9P244 AC100770.1-201ENST00000532310 322 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.8□□□□□ -1.8
LRFN1Q9P244 RPL21P12-201ENST00000559810 515 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.8□□□□□ -1.8
LRFN1Q9P244 AL136363.1-201ENST00000605349 337 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 AC009570.1-201ENST00000609599 745 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 MIR6875-201ENST00000617506 72 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 MTND5P26-201ENST00000426018 1752 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
LRFN1Q9P244 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.8□□□□□ -1.8
LRFN1Q9P244 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms