Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
VAPAQ9P0L0 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.31□□□□□ -2.04
VAPAQ9P0L0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.31□□□□□ -2.04
VAPAQ9P0L0 RNU5B-1-201ENST00000363286 116 ntBASIC2.3□□□□□ -2.04
VAPAQ9P0L0 RNU6-609P-201ENST00000365459 107 ntBASIC2.3□□□□□ -2.04
VAPAQ9P0L0 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
VAPAQ9P0L0 RNU6-76P-201ENST00000384060 104 ntBASIC2.3□□□□□ -2.04
VAPAQ9P0L0 MIR27B-201ENST00000385129 97 ntBASIC2.3□□□□□ -2.04
VAPAQ9P0L0 RPL22P22-201ENST00000395439 379 ntBASIC2.3□□□□□ -2.04
VAPAQ9P0L0 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
VAPAQ9P0L0 AL139039.1-201ENST00000401900 692 ntBASIC2.3□□□□□ -2.04
VAPAQ9P0L0 RNU2-52P-201ENST00000410680 190 ntBASIC2.3□□□□□ -2.04
VAPAQ9P0L0 RN7SKP27-201ENST00000410684 333 ntBASIC2.3□□□□□ -2.04
VAPAQ9P0L0 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.3□□□□□ -2.04
VAPAQ9P0L0 MTCO2P1-201ENST00000424648 477 ntBASIC2.3□□□□□ -2.04
VAPAQ9P0L0 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.3□□□□□ -2.04
VAPAQ9P0L0 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.3□□□□□ -2.04
VAPAQ9P0L0 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.3□□□□□ -2.04
VAPAQ9P0L0 OFD1P3Y-201ENST00000453312 783 ntBASIC2.3□□□□□ -2.04
VAPAQ9P0L0 RNU7-23P-201ENST00000459465 62 ntBASIC2.3□□□□□ -2.04
VAPAQ9P0L0 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.3□□□□□ -2.04
VAPAQ9P0L0 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.3□□□□□ -2.04
VAPAQ9P0L0 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.3□□□□□ -2.04
VAPAQ9P0L0 AC103783.1-201ENST00000520506 373 ntBASIC2.3□□□□□ -2.04
VAPAQ9P0L0 COX6CP8-201ENST00000522620 226 ntBASIC2.3□□□□□ -2.04
VAPAQ9P0L0 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.3□□□□□ -2.04
VAPAQ9P0L0 GLYCAM1-201ENST00000546596 285 ntBASIC2.3□□□□□ -2.04
VAPAQ9P0L0 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.3□□□□□ -2.04
VAPAQ9P0L0 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC2.3□□□□□ -2.04
VAPAQ9P0L0 AC004853.1-201ENST00000604902 698 ntBASIC2.3□□□□□ -2.04
VAPAQ9P0L0 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VAPAQ9P0L0 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.3□□□□□ -2.04
VAPAQ9P0L0 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.3□□□□□ -2.04
VAPAQ9P0L0 AL022578.1-201ENST00000439330 1433 ntBASIC2.3□□□□□ -2.04
VAPAQ9P0L0 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VAPAQ9P0L0 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
VAPAQ9P0L0 AL359693.1-201ENST00000614959 2407 ntBASIC2.3□□□□□ -2.04
VAPAQ9P0L0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VAPAQ9P0L0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.3□□□□□ -2.04
VAPAQ9P0L0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VAPAQ9P0L0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
VAPAQ9P0L0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.29□□□□□ -2.04
VAPAQ9P0L0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VAPAQ9P0L0 OR4G2P-202ENST00000641004 1759 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 CR848007.1-201ENST00000442354 1699 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.29□□□□□ -2.04
VAPAQ9P0L0 AC005832.2-201ENST00000538921 1430 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VAPAQ9P0L0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VAPAQ9P0L0 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.29□□□□□ -2.04
VAPAQ9P0L0 AL139276.1-201ENST00000311910 1001 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VAPAQ9P0L0 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VAPAQ9P0L0 U3.20-201ENST00000390909 217 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 U3.37-201ENST00000408528 213 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 LUZP4P1-201ENST00000415420 344 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 Z85995.1-201ENST00000415547 335 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 NDUFB4P7-201ENST00000423198 363 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VAPAQ9P0L0 BTBD7P2-201ENST00000441962 620 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.29□□□□□ -2.04
VAPAQ9P0L0 AC026410.2-201ENST00000460281 156 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 RBM43P1-201ENST00000476891 1081 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 AC027338.1-201ENST00000514840 825 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 RN7SKP24-201ENST00000515888 284 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 RNA5SP320-201ENST00000516263 124 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 RNU6-1256P-201ENST00000516539 103 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 RNU6-334P-201ENST00000517072 102 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 SNORA31.22-201ENST00000517204 135 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 AC087808.1-201ENST00000520501 361 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.29□□□□□ -2.04
VAPAQ9P0L0 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.29□□□□□ -2.04
VAPAQ9P0L0 AC078814.3-201ENST00000553036 491 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.29□□□□□ -2.04
VAPAQ9P0L0 AC138915.2-201ENST00000569776 97 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
VAPAQ9P0L0 AL451007.1-201ENST00000595491 289 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 VN1R90P-201ENST00000595717 726 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 AL022067.1-201ENST00000602426 454 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 AL118556.2-201ENST00000614375 824 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 AC034102.8-201ENST00000615146 484 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 AC078880.5-201ENST00000617845 421 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.29□□□□□ -2.04
VAPAQ9P0L0 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.29□□□□□ -2.04
VAPAQ9P0L0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
VAPAQ9P0L0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
VAPAQ9P0L0 SDAD1P2-201ENST00000441308 2028 ntBASIC2.29□□□□□ -2.04
VAPAQ9P0L0 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
VAPAQ9P0L0 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
VAPAQ9P0L0 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
VAPAQ9P0L0 RNU6-461P-201ENST00000364195 107 ntBASIC2.28□□□□□ -2.04
VAPAQ9P0L0 RNU6-207P-201ENST00000384137 107 ntBASIC2.28□□□□□ -2.04
VAPAQ9P0L0 MIR23B-201ENST00000384832 97 ntBASIC2.28□□□□□ -2.04
VAPAQ9P0L0 AC007064.1-201ENST00000412238 351 ntBASIC2.28□□□□□ -2.04
VAPAQ9P0L0 MTATP6P27-201ENST00000416987 621 ntBASIC2.28□□□□□ -2.04
VAPAQ9P0L0 CCDC58P2-201ENST00000417131 366 ntBASIC2.28□□□□□ -2.04
VAPAQ9P0L0 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.28□□□□□ -2.04
VAPAQ9P0L0 AL358075.3-201ENST00000426289 226 ntBASIC2.28□□□□□ -2.04
VAPAQ9P0L0 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.28□□□□□ -2.04
VAPAQ9P0L0 AC107083.1-201ENST00000439643 279 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms