Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 AC091153.1-201ENST00000466297 402 ntBASIC2.89□□□□□ -1.95
POLE3Q9NRF9 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
POLE3Q9NRF9 AC116353.3-201ENST00000511215 249 ntBASIC2.89□□□□□ -1.95
POLE3Q9NRF9 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.89□□□□□ -1.95
POLE3Q9NRF9 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.89□□□□□ -1.95
POLE3Q9NRF9 AL133271.1-201ENST00000538229 291 ntBASIC2.89□□□□□ -1.95
POLE3Q9NRF9 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.89□□□□□ -1.95
POLE3Q9NRF9 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.89□□□□□ -1.95
POLE3Q9NRF9 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.89□□□□□ -1.95
POLE3Q9NRF9 AC009712.1-201ENST00000564938 316 ntBASIC2.89□□□□□ -1.95
POLE3Q9NRF9 AC034105.3-201ENST00000565294 442 ntBASIC2.89□□□□□ -1.95
POLE3Q9NRF9 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.89□□□□□ -1.95
POLE3Q9NRF9 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.89□□□□□ -1.95
POLE3Q9NRF9 TPMTP1-201ENST00000592307 737 ntBASIC2.89□□□□□ -1.95
POLE3Q9NRF9 AL357094.1-201ENST00000603845 844 ntBASIC2.89□□□□□ -1.95
POLE3Q9NRF9 ELOCP35-201ENST00000604289 336 ntBASIC2.89□□□□□ -1.95
POLE3Q9NRF9 AC090186.1-201ENST00000605991 572 ntBASIC2.89□□□□□ -1.95
POLE3Q9NRF9 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.89□□□□□ -1.95
POLE3Q9NRF9 AL121652.1-201ENST00000608851 448 ntBASIC2.89□□□□□ -1.95
POLE3Q9NRF9 AL161734.1-201ENST00000609720 557 ntBASIC2.89□□□□□ -1.95
POLE3Q9NRF9 AL359198.2-201ENST00000611836 194 ntBASIC2.89□□□□□ -1.95
POLE3Q9NRF9 AC010133.1-201ENST00000615809 842 ntBASIC2.89□□□□□ -1.95
POLE3Q9NRF9 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.89□□□□□ -1.95
POLE3Q9NRF9 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.89□□□□□ -1.95
POLE3Q9NRF9 AC099063.3-201ENST00000642066 185 ntBASIC2.89□□□□□ -1.95
POLE3Q9NRF9 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
POLE3Q9NRF9 AL035425.3-201ENST00000564206 4996 ntBASIC2.89□□□□□ -1.95
POLE3Q9NRF9 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.89□□□□□ -1.95
POLE3Q9NRF9 AC092447.10-201ENST00000620607 1652 ntBASIC2.88□□□□□ -1.95
POLE3Q9NRF9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
POLE3Q9NRF9 DDX43P2-201ENST00000604753 1354 ntBASIC2.88□□□□□ -1.95
POLE3Q9NRF9 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.88□□□□□ -1.95
POLE3Q9NRF9 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.88□□□□□ -1.95
POLE3Q9NRF9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
POLE3Q9NRF9 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
POLE3Q9NRF9 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
POLE3Q9NRF9 RNU6-217P-201ENST00000384164 104 ntBASIC2.88□□□□□ -1.95
POLE3Q9NRF9 RNU6-432P-201ENST00000384196 109 ntBASIC2.88□□□□□ -1.95
POLE3Q9NRF9 MIR7-3-201ENST00000384898 110 ntBASIC2.88□□□□□ -1.95
POLE3Q9NRF9 RNU6-754P-201ENST00000391166 107 ntBASIC2.88□□□□□ -1.95
POLE3Q9NRF9 TXNP7-201ENST00000406296 293 ntBASIC2.88□□□□□ -1.95
POLE3Q9NRF9 RNA5SP274-201ENST00000410484 108 ntBASIC2.88□□□□□ -1.95
POLE3Q9NRF9 MTND1P21-201ENST00000412991 285 ntBASIC2.88□□□□□ -1.95
POLE3Q9NRF9 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.88□□□□□ -1.95
POLE3Q9NRF9 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.88□□□□□ -1.95
POLE3Q9NRF9 AC245054.2-201ENST00000415639 319 ntBASIC2.88□□□□□ -1.95
POLE3Q9NRF9 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.88□□□□□ -1.95
POLE3Q9NRF9 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.88□□□□□ -1.95
POLE3Q9NRF9 GTF2IP20-201ENST00000431663 360 ntBASIC2.88□□□□□ -1.95
POLE3Q9NRF9 FGF7P5-201ENST00000441829 291 ntBASIC2.88□□□□□ -1.95
POLE3Q9NRF9 VN1R34P-201ENST00000447387 883 ntBASIC2.88□□□□□ -1.95
POLE3Q9NRF9 RPL21P134-201ENST00000453468 483 ntBASIC2.88□□□□□ -1.95
POLE3Q9NRF9 AC005410.1-202ENST00000460347 485 ntBASIC2.88□□□□□ -1.95
POLE3Q9NRF9 RN7SL863P-201ENST00000462370 296 ntBASIC2.88□□□□□ -1.95
POLE3Q9NRF9 AP001025.2-201ENST00000490908 477 ntBASIC2.88□□□□□ -1.95
POLE3Q9NRF9 SUMO2P6-201ENST00000505273 288 ntBASIC2.88□□□□□ -1.95
POLE3Q9NRF9 MRPS36P2-201ENST00000512569 299 ntBASIC2.88□□□□□ -1.95
POLE3Q9NRF9 NRON-201ENST00000517270 370 ntBASIC2.88□□□□□ -1.95
POLE3Q9NRF9 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.88□□□□□ -1.95
POLE3Q9NRF9 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
POLE3Q9NRF9 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
POLE3Q9NRF9 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.88□□□□□ -1.95
POLE3Q9NRF9 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.88□□□□□ -1.95
POLE3Q9NRF9 AC138761.3-201ENST00000579993 334 ntBASIC2.88□□□□□ -1.95
POLE3Q9NRF9 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.88□□□□□ -1.95
POLE3Q9NRF9 AP001269.3-201ENST00000588718 329 ntBASIC2.88□□□□□ -1.95
POLE3Q9NRF9 AC107075.1-201ENST00000613695 314 ntBASIC2.88□□□□□ -1.95
POLE3Q9NRF9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
POLE3Q9NRF9 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.88□□□□□ -1.95
POLE3Q9NRF9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
POLE3Q9NRF9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
POLE3Q9NRF9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
POLE3Q9NRF9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.87□□□□□ -1.95
POLE3Q9NRF9 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
POLE3Q9NRF9 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
POLE3Q9NRF9 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
POLE3Q9NRF9 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
POLE3Q9NRF9 Y_RNA.192-201ENST00000363977 102 ntBASIC2.87□□□□□ -1.95
POLE3Q9NRF9 RNA5SP72-201ENST00000364442 117 ntBASIC2.87□□□□□ -1.95
POLE3Q9NRF9 RNU6-140P-201ENST00000384566 108 ntBASIC2.87□□□□□ -1.95
POLE3Q9NRF9 RPL21P3-201ENST00000395517 478 ntBASIC2.87□□□□□ -1.95
POLE3Q9NRF9 AC110754.1-201ENST00000399740 601 ntBASIC2.87□□□□□ -1.95
POLE3Q9NRF9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.87□□□□□ -1.95
POLE3Q9NRF9 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.87□□□□□ -1.95
POLE3Q9NRF9 MTCYBP38-201ENST00000417160 1123 ntBASIC2.87□□□□□ -1.95
POLE3Q9NRF9 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.87□□□□□ -1.95
POLE3Q9NRF9 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.87□□□□□ -1.95
POLE3Q9NRF9 AC005326.1-201ENST00000429197 123 ntBASIC2.87□□□□□ -1.95
POLE3Q9NRF9 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.87□□□□□ -1.95
POLE3Q9NRF9 RPS25P9-201ENST00000435591 252 ntBASIC2.87□□□□□ -1.95
POLE3Q9NRF9 RPL35AP22-201ENST00000436855 335 ntBASIC2.87□□□□□ -1.95
POLE3Q9NRF9 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.87□□□□□ -1.95
POLE3Q9NRF9 CYCSP32-201ENST00000440548 321 ntBASIC2.87□□□□□ -1.95
POLE3Q9NRF9 EEF1E1P1-201ENST00000446998 430 ntBASIC2.87□□□□□ -1.95
POLE3Q9NRF9 AL162389.1-201ENST00000449233 177 ntBASIC2.87□□□□□ -1.95
POLE3Q9NRF9 RPS15AP34-201ENST00000487776 387 ntBASIC2.87□□□□□ -1.95
POLE3Q9NRF9 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.87□□□□□ -1.95
POLE3Q9NRF9 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.87□□□□□ -1.95
POLE3Q9NRF9 RN7SKP43-201ENST00000516173 320 ntBASIC2.87□□□□□ -1.95
POLE3Q9NRF9 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms