Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.82□□□□□ -1.96
NXF3Q9H4D5 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.82□□□□□ -1.96
NXF3Q9H4D5 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.82□□□□□ -1.96
NXF3Q9H4D5 AP005205.1-201ENST00000563503 508 ntBASIC2.82□□□□□ -1.96
NXF3Q9H4D5 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.82□□□□□ -1.96
NXF3Q9H4D5 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.82□□□□□ -1.96
NXF3Q9H4D5 BNIP3P26-201ENST00000600827 554 ntBASIC2.82□□□□□ -1.96
NXF3Q9H4D5 DUXAP4-201ENST00000603046 613 ntBASIC2.82□□□□□ -1.96
NXF3Q9H4D5 XIAPP1-201ENST00000603162 600 ntBASIC2.82□□□□□ -1.96
NXF3Q9H4D5 AC010738.1-201ENST00000604970 987 ntBASIC2.82□□□□□ -1.96
NXF3Q9H4D5 AC092954.1-201ENST00000609121 445 ntBASIC2.82□□□□□ -1.96
NXF3Q9H4D5 AC005332.6-201ENST00000613178 446 ntBASIC2.82□□□□□ -1.96
NXF3Q9H4D5 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.82□□□□□ -1.96
NXF3Q9H4D5 CR381653.2-201ENST00000624041 768 ntBASIC2.82□□□□□ -1.96
NXF3Q9H4D5 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.82□□□□□ -1.96
NXF3Q9H4D5 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.81□□□□□ -1.96
NXF3Q9H4D5 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
NXF3Q9H4D5 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NXF3Q9H4D5 AP000568.1-201ENST00000282964 442 ntBASIC2.81□□□□□ -1.96
NXF3Q9H4D5 SNORD82-201ENST00000365530 70 ntBASIC2.81□□□□□ -1.96
NXF3Q9H4D5 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
NXF3Q9H4D5 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
NXF3Q9H4D5 CD24P4-201ENST00000382840 243 ntBASIC2.81□□□□□ -1.96
NXF3Q9H4D5 RNU6-301P-201ENST00000384277 107 ntBASIC2.81□□□□□ -1.96
NXF3Q9H4D5 MIR506-201ENST00000384998 124 ntBASIC2.81□□□□□ -1.96
NXF3Q9H4D5 SNORD88.1-201ENST00000408684 91 ntBASIC2.81□□□□□ -1.96
NXF3Q9H4D5 RNU6-712P-201ENST00000410558 100 ntBASIC2.81□□□□□ -1.96
NXF3Q9H4D5 AL161449.1-201ENST00000414531 1199 ntBASIC2.81□□□□□ -1.96
NXF3Q9H4D5 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.81□□□□□ -1.96
NXF3Q9H4D5 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.81□□□□□ -1.96
NXF3Q9H4D5 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.81□□□□□ -1.96
NXF3Q9H4D5 MTCYBP34-201ENST00000439552 670 ntBASIC2.81□□□□□ -1.96
NXF3Q9H4D5 CR769776.1-201ENST00000441254 787 ntBASIC2.81□□□□□ -1.96
NXF3Q9H4D5 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.81□□□□□ -1.96
NXF3Q9H4D5 MRPL50P4-201ENST00000446432 475 ntBASIC2.81□□□□□ -1.96
NXF3Q9H4D5 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.81□□□□□ -1.96
NXF3Q9H4D5 AC013828.1-201ENST00000481845 158 ntBASIC2.81□□□□□ -1.96
NXF3Q9H4D5 AC093767.1-201ENST00000504523 156 ntBASIC2.81□□□□□ -1.96
NXF3Q9H4D5 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.81□□□□□ -1.96
NXF3Q9H4D5 AC008837.2-201ENST00000513076 418 ntBASIC2.81□□□□□ -1.96
NXF3Q9H4D5 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.81□□□□□ -1.96
NXF3Q9H4D5 RNA5SP320-201ENST00000516263 124 ntBASIC2.81□□□□□ -1.96
NXF3Q9H4D5 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.81□□□□□ -1.96
NXF3Q9H4D5 ERHP1-201ENST00000523006 310 ntBASIC2.81□□□□□ -1.96
NXF3Q9H4D5 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.81□□□□□ -1.96
NXF3Q9H4D5 AC005832.3-201ENST00000537929 631 ntBASIC2.81□□□□□ -1.96
NXF3Q9H4D5 AC128657.1-201ENST00000549459 145 ntBASIC2.81□□□□□ -1.96
NXF3Q9H4D5 EEF1B2P4-201ENST00000551398 348 ntBASIC2.81□□□□□ -1.96
NXF3Q9H4D5 DNAJC8P1-201ENST00000554535 372 ntBASIC2.81□□□□□ -1.96
NXF3Q9H4D5 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.81□□□□□ -1.96
NXF3Q9H4D5 AC138915.2-201ENST00000569776 97 ntBASIC2.81□□□□□ -1.96
NXF3Q9H4D5 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.81□□□□□ -1.96
NXF3Q9H4D5 AC006386.1-201ENST00000619436 415 ntBASIC2.81□□□□□ -1.96
NXF3Q9H4D5 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.81□□□□□ -1.96
NXF3Q9H4D5 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.81□□□□□ -1.96
NXF3Q9H4D5 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.81□□□□□ -1.96
NXF3Q9H4D5 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.81□□□□□ -1.96
NXF3Q9H4D5 SGO1P2-201ENST00000429458 1589 ntBASIC2.81□□□□□ -1.96
NXF3Q9H4D5 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.81□□□□□ -1.96
NXF3Q9H4D5 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NXF3Q9H4D5 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.8□□□□□ -1.96
NXF3Q9H4D5 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.8□□□□□ -1.96
NXF3Q9H4D5 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
NXF3Q9H4D5 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.8□□□□□ -1.96
NXF3Q9H4D5 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.8□□□□□ -1.96
NXF3Q9H4D5 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NXF3Q9H4D5 AC107982.1-201ENST00000507171 1300 ntBASIC2.8□□□□□ -1.96
NXF3Q9H4D5 RNU5D-1-201ENST00000363299 116 ntBASIC2.8□□□□□ -1.96
NXF3Q9H4D5 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.8□□□□□ -1.96
NXF3Q9H4D5 RNU2-42P-201ENST00000410697 113 ntBASIC2.8□□□□□ -1.96
NXF3Q9H4D5 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.8□□□□□ -1.96
NXF3Q9H4D5 AC009963.1-201ENST00000417265 157 ntBASIC2.8□□□□□ -1.96
NXF3Q9H4D5 ELOCP9-201ENST00000418624 239 ntBASIC2.8□□□□□ -1.96
NXF3Q9H4D5 AL139413.1-201ENST00000421309 217 ntBASIC2.8□□□□□ -1.96
NXF3Q9H4D5 YWHAZP7-201ENST00000436906 631 ntBASIC2.8□□□□□ -1.96
NXF3Q9H4D5 AC011816.1-201ENST00000441346 546 ntBASIC2.8□□□□□ -1.96
NXF3Q9H4D5 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NXF3Q9H4D5 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.8□□□□□ -1.96
NXF3Q9H4D5 RN7SKP265-201ENST00000516448 223 ntBASIC2.8□□□□□ -1.96
NXF3Q9H4D5 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.8□□□□□ -1.96
NXF3Q9H4D5 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NXF3Q9H4D5 AC090502.2-201ENST00000549267 280 ntBASIC2.8□□□□□ -1.96
NXF3Q9H4D5 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.8□□□□□ -1.96
NXF3Q9H4D5 MTND4P33-201ENST00000556706 766 ntBASIC2.8□□□□□ -1.96
NXF3Q9H4D5 AL157394.1-201ENST00000562983 1224 ntBASIC2.8□□□□□ -1.96
NXF3Q9H4D5 AC087481.2-201ENST00000565492 330 ntBASIC2.8□□□□□ -1.96
NXF3Q9H4D5 AC022662.1-201ENST00000580252 331 ntBASIC2.8□□□□□ -1.96
NXF3Q9H4D5 COX6CP3-201ENST00000580869 223 ntBASIC2.8□□□□□ -1.96
NXF3Q9H4D5 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.8□□□□□ -1.96
NXF3Q9H4D5 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.8□□□□□ -1.96
NXF3Q9H4D5 AC013244.3-201ENST00000605614 388 ntBASIC2.8□□□□□ -1.96
NXF3Q9H4D5 AC107075.1-201ENST00000613695 314 ntBASIC2.8□□□□□ -1.96
NXF3Q9H4D5 AL355810.1-201ENST00000614629 552 ntBASIC2.8□□□□□ -1.96
NXF3Q9H4D5 AC008993.2-201ENST00000631744 806 ntBASIC2.8□□□□□ -1.96
NXF3Q9H4D5 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
NXF3Q9H4D5 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.8□□□□□ -1.96
NXF3Q9H4D5 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.79□□□□□ -1.96
NXF3Q9H4D5 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NXF3Q9H4D5 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.79□□□□□ -1.96
NXF3Q9H4D5 Y_RNA.25-201ENST00000362528 102 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms