Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 AL031119.1-201ENST00000404707 1879 ntBASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 RNU6-1287P-201ENST00000362914 107 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 RNU6-188P-201ENST00000364207 107 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 SNORD51-201ENST00000384320 80 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 RNU6-1060P-201ENST00000384664 107 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 MIR568-201ENST00000385036 95 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 AL590762.2-201ENST00000395798 571 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 AL360182.1-201ENST00000397433 468 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 RNU6-387P-201ENST00000411331 105 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 AC073264.2-201ENST00000448886 166 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 MTCO3P10-201ENST00000455912 772 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 RPL30P15-201ENST00000457129 321 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 AC079140.5-201ENST00000507882 310 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 RNU6-27P-201ENST00000516146 107 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 RNU6-1092P-201ENST00000516955 87 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 RN7SKP295-201ENST00000517264 153 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 IGLVIV-53-201ENST00000520107 367 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 COX6CP5-201ENST00000527162 228 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 AP006289.1-201ENST00000538089 277 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 AC004817.2-201ENST00000561794 651 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 7SK.7-201ENST00000603504 247 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 AL451044.1-201ENST00000604867 238 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 AL157817.1-201ENST00000614264 790 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 AC133104.2-201ENST00000615272 193 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 AL161637.1-201ENST00000622380 412 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 AC091925.2-201ENST00000625059 256 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 MIR7641-1-201ENST00000627518 61 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 API5P2-201ENST00000397055 1498 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 MTND4P1-201ENST00000457501 1466 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 SAMMSON-226ENST00000642089 1582 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 TPTE2P4-201ENST00000258589 1605 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 AC009229.4-201ENST00000623854 1947 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 AC007390.2-201ENST00000606229 3803 ntBASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.85□□□□□ -1.63
FOXP3Q9BZS1 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 AC066616.2-201ENST00000559334 1481 ntBASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 AL136164.3-201ENST00000624429 3978 ntBASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 RNVU1-3-201ENST00000364313 161 ntBASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 SOD2P1-201ENST00000396543 562 ntBASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 AC114755.2-201ENST00000413520 361 ntBASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 MTCYBP9-201ENST00000431021 303 ntBASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 RPL35AP22-201ENST00000436855 335 ntBASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 TXNP1-201ENST00000441872 371 ntBASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 RPL23AP56-201ENST00000460778 453 ntBASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 RN7SL481P-201ENST00000477764 299 ntBASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 RPL21P93-201ENST00000480465 489 ntBASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 AC104806.1-201ENST00000508720 308 ntBASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 RNU6-976P-201ENST00000516086 111 ntBASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 AC009902.1-201ENST00000519351 183 ntBASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 AC090151.1-201ENST00000520784 730 ntBASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 AP003122.3-201ENST00000526316 255 ntBASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 SETP7-201ENST00000552169 453 ntBASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 HMGB3P26-201ENST00000560051 582 ntBASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 AC091042.1-201ENST00000579213 173 ntBASIC4.84□□□□□ -1.63
FOXP3Q9BZS1 AC138761.3-201ENST00000579993 334 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms