Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 RPL17P49-201ENST00000443728 411 ntBASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 AC010460.2-201ENST00000509054 677 ntBASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 RNU6-1095P-201ENST00000516148 108 ntBASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 IGKV3-31-201ENST00000523109 329 ntBASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 AP001189.2-201ENST00000527320 189 ntBASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 DEFB130C-202ENST00000530001 230 ntBASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 AC128657.1-201ENST00000549459 145 ntBASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 AP003476.1-201ENST00000623984 516 ntBASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 CUL1P1-201ENST00000509510 2425 ntBASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3□□□□□ -1.93
RPAP1Q9BWH6 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3□□□□□ -1.93
RPAP1Q9BWH6 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3□□□□□ -1.93
RPAP1Q9BWH6 SNORD65.1-201ENST00000390889 71 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 MTCO1P56-201ENST00000401674 224 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3□□□□□ -1.93
RPAP1Q9BWH6 MTATP6P19-201ENST00000413797 659 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 AL096701.2-201ENST00000416920 238 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 MTCO1P39-201ENST00000426148 480 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 PSMA6P3-201ENST00000428242 164 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 FCF1P1-201ENST00000432690 571 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 AC009961.3-201ENST00000449832 765 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 AC079776.3-201ENST00000450665 370 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 RPS23P3-201ENST00000470993 430 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 RNU6-1028P-201ENST00000517164 93 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 RNU6-1261P-201ENST00000517194 104 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 AC025881.1-201ENST00000518851 512 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3□□□□□ -1.93
RPAP1Q9BWH6 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3□□□□□ -1.93
RPAP1Q9BWH6 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3□□□□□ -1.93
RPAP1Q9BWH6 AC104072.1-201ENST00000568817 668 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 AC138915.2-201ENST00000569776 97 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 FAM60BP-201ENST00000578364 658 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 AL035411.2-201ENST00000604022 421 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 AC103810.6-201ENST00000606708 136 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 AC092574.1-201ENST00000609771 420 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3□□□□□ -1.93
RPAP1Q9BWH6 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RPAP1Q9BWH6 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3□□□□□ -1.93
RPAP1Q9BWH6 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
RPAP1Q9BWH6 AL162578.1-201ENST00000406202 378 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 RN7SKP223-201ENST00000410582 62 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 RNU4-53P-201ENST00000410828 140 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 AL135786.1-201ENST00000415892 214 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3□□□□□ -1.93
RPAP1Q9BWH6 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3□□□□□ -1.93
RPAP1Q9BWH6 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3□□□□□ -1.93
RPAP1Q9BWH6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3□□□□□ -1.93
RPAP1Q9BWH6 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3□□□□□ -1.93
RPAP1Q9BWH6 OR4G11P-201ENST00000492842 939 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 RPS29P21-201ENST00000496272 170 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 AIG1P1-201ENST00000503376 148 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3□□□□□ -1.93
RPAP1Q9BWH6 SUMO2P5-201ENST00000506790 245 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3□□□□□ -1.93
RPAP1Q9BWH6 AC010625.1-201ENST00000511296 403 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3□□□□□ -1.93
RPAP1Q9BWH6 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3□□□□□ -1.93
RPAP1Q9BWH6 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3□□□□□ -1.93
RPAP1Q9BWH6 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3□□□□□ -1.93
RPAP1Q9BWH6 AC010975.3-201ENST00000618727 978 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3□□□□□ -1.93
RPAP1Q9BWH6 U6.101-201ENST00000637707 76 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 MKKS-204ENST00000639674 192 ntBASIC3□□□□□ -1.93
RPAP1Q9BWH6 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.99□□□□□ -1.93
RPAP1Q9BWH6 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.99□□□□□ -1.93
RPAP1Q9BWH6 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.99□□□□□ -1.93
RPAP1Q9BWH6 RNU6-878P-201ENST00000384578 110 ntBASIC2.99□□□□□ -1.93
RPAP1Q9BWH6 AL359511.1-201ENST00000402970 211 ntBASIC2.99□□□□□ -1.93
RPAP1Q9BWH6 AC109780.2-201ENST00000413467 845 ntBASIC2.99□□□□□ -1.93
RPAP1Q9BWH6 RPL7P30-201ENST00000420888 709 ntBASIC2.99□□□□□ -1.93
RPAP1Q9BWH6 RPS12P2-201ENST00000439728 269 ntBASIC2.99□□□□□ -1.93
RPAP1Q9BWH6 USP9YP34-201ENST00000453983 808 ntBASIC2.99□□□□□ -1.93
RPAP1Q9BWH6 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.99□□□□□ -1.93
RPAP1Q9BWH6 snoU13.23-201ENST00000458863 104 ntBASIC2.99□□□□□ -1.93
RPAP1Q9BWH6 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.99□□□□□ -1.93
RPAP1Q9BWH6 AC234781.5-201ENST00000508429 271 ntBASIC2.99□□□□□ -1.93
RPAP1Q9BWH6 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.99□□□□□ -1.93
RPAP1Q9BWH6 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RPAP1Q9BWH6 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.99□□□□□ -1.93
RPAP1Q9BWH6 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.99□□□□□ -1.93
RPAP1Q9BWH6 AC090695.1-201ENST00000561269 1222 ntBASIC2.99□□□□□ -1.93
RPAP1Q9BWH6 BNIP3P24-201ENST00000593398 557 ntBASIC2.99□□□□□ -1.93
RPAP1Q9BWH6 AC091057.2-201ENST00000602594 792 ntBASIC2.99□□□□□ -1.93
RPAP1Q9BWH6 AL137847.3-201ENST00000611521 109 ntBASIC2.99□□□□□ -1.93
RPAP1Q9BWH6 AC068831.7-201ENST00000616954 363 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms