Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 RPL7P50-201ENST00000600588 727 ntBASIC4.19□□□□□ -1.74
NDC1Q9BTX1 AC114781.5-201ENST00000615297 108 ntBASIC4.19□□□□□ -1.74
NDC1Q9BTX1 AC140479.6-201ENST00000633535 357 ntBASIC4.19□□□□□ -1.74
NDC1Q9BTX1 AL133216.2-202ENST00000634512 349 ntBASIC4.19□□□□□ -1.74
NDC1Q9BTX1 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 AC244517.1-201ENST00000606030 2086 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 AP004289.2-201ENST00000444413 1457 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
NDC1Q9BTX1 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.18□□□□□ -1.74
NDC1Q9BTX1 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NDC1Q9BTX1 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NDC1Q9BTX1 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.18□□□□□ -1.74
NDC1Q9BTX1 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NDC1Q9BTX1 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
NDC1Q9BTX1 RNU1-94P-201ENST00000362627 173 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 RNU6-552P-201ENST00000362869 119 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 RNU4-44P-201ENST00000363050 141 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 Y_RNA.100-201ENST00000363141 102 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 Y_RNA.132-201ENST00000363421 102 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.18□□□□□ -1.74
NDC1Q9BTX1 AL606923.1-201ENST00000406616 190 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 SNORA11F-201ENST00000408237 128 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 RN7SKP159-201ENST00000410657 292 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.18□□□□□ -1.74
NDC1Q9BTX1 AL137014.1-201ENST00000420490 1226 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.18□□□□□ -1.74
NDC1Q9BTX1 AL451054.2-201ENST00000420896 202 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 AC236972.2-201ENST00000434979 310 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.18□□□□□ -1.74
NDC1Q9BTX1 AC005094.1-201ENST00000440420 368 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 PPIAP3-201ENST00000450588 505 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 AC007967.1-201ENST00000455422 1159 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 snoU13.3-201ENST00000459441 104 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.18□□□□□ -1.74
NDC1Q9BTX1 RN7SKP21-201ENST00000516503 220 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 AC008694.2-201ENST00000517591 306 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 RPL7P20-201ENST00000520308 745 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.18□□□□□ -1.74
NDC1Q9BTX1 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.18□□□□□ -1.74
NDC1Q9BTX1 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.18□□□□□ -1.74
NDC1Q9BTX1 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.18□□□□□ -1.74
NDC1Q9BTX1 HNRNPCP4-201ENST00000571636 900 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 BNIP3P22-201ENST00000593399 556 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 AC008638.3-201ENST00000603341 463 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 LLPHP1-201ENST00000603571 367 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 ARF4P1-201ENST00000605447 541 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 AC099669.2-201ENST00000616549 437 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 MTND5P3-201ENST00000438536 1800 ntBASIC4.18□□□□□ -1.74
NDC1Q9BTX1 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NDC1Q9BTX1 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NDC1Q9BTX1 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NDC1Q9BTX1 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.17□□□□□ -1.74
NDC1Q9BTX1 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 AC073343.1-201ENST00000328239 651 ntBASIC4.17□□□□□ -1.74
NDC1Q9BTX1 Y_RNA.373-201ENST00000365600 103 ntBASIC4.17□□□□□ -1.74
NDC1Q9BTX1 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 Y_RNA.387-201ENST00000383918 102 ntBASIC4.17□□□□□ -1.74
NDC1Q9BTX1 RNU6-1029P-201ENST00000384109 107 ntBASIC4.17□□□□□ -1.74
NDC1Q9BTX1 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 RNU6-837P-201ENST00000391056 108 ntBASIC4.17□□□□□ -1.74
NDC1Q9BTX1 RNU4-65P-201ENST00000410473 140 ntBASIC4.17□□□□□ -1.74
NDC1Q9BTX1 HSPE1P1-201ENST00000421494 318 ntBASIC4.17□□□□□ -1.74
NDC1Q9BTX1 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 ATP5HP2-201ENST00000433885 485 ntBASIC4.17□□□□□ -1.74
NDC1Q9BTX1 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.17□□□□□ -1.74
NDC1Q9BTX1 AL118520.1-201ENST00000450770 291 ntBASIC4.17□□□□□ -1.74
NDC1Q9BTX1 NIPA2P5-201ENST00000452282 464 ntBASIC4.17□□□□□ -1.74
NDC1Q9BTX1 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 SNORD97-201ENST00000459187 142 ntBASIC4.17□□□□□ -1.74
NDC1Q9BTX1 MTND4P17-201ENST00000470444 350 ntBASIC4.17□□□□□ -1.74
NDC1Q9BTX1 RPS15AP36-201ENST00000492022 382 ntBASIC4.17□□□□□ -1.74
NDC1Q9BTX1 RPL7P23-201ENST00000493874 747 ntBASIC4.17□□□□□ -1.74
NDC1Q9BTX1 MTND5P5-201ENST00000503764 376 ntBASIC4.17□□□□□ -1.74
NDC1Q9BTX1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.17□□□□□ -1.74
NDC1Q9BTX1 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 IGHV3-29-201ENST00000604817 344 ntBASIC4.17□□□□□ -1.74
NDC1Q9BTX1 AC010680.4-201ENST00000605334 543 ntBASIC4.17□□□□□ -1.74
NDC1Q9BTX1 AL162730.1-201ENST00000605734 292 ntBASIC4.17□□□□□ -1.74
NDC1Q9BTX1 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 AC023043.4-201ENST00000612081 449 ntBASIC4.17□□□□□ -1.74
NDC1Q9BTX1 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms