Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NPAS1Q99742 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NPAS1Q99742 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPAS1Q99742 Z82217.1-201ENST00000625157 8149 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPAS1Q99742 SPRR2C-201ENST00000290702 219 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 HSPE1P11-201ENST00000339579 310 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 RNU6-50P-201ENST00000362356 103 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 RNU6-1284P-201ENST00000363701 100 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 RNA5SP283-201ENST00000365604 119 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 RNU6-1103P-201ENST00000384150 107 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
NPAS1Q99742 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
NPAS1Q99742 MTATP6P18-201ENST00000417994 673 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.67□□□□□ -1.82
NPAS1Q99742 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.67□□□□□ -1.82
NPAS1Q99742 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.67□□□□□ -1.82
NPAS1Q99742 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.67□□□□□ -1.82
NPAS1Q99742 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.67□□□□□ -1.82
NPAS1Q99742 AC017083.1-201ENST00000428093 483 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 TIMM9P3-201ENST00000428659 274 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 AL139415.2-201ENST00000431968 163 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 AL138799.3-201ENST00000438968 350 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 RPL26P6-201ENST00000440913 438 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.67□□□□□ -1.82
NPAS1Q99742 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.67□□□□□ -1.82
NPAS1Q99742 MTATP6P30-201ENST00000443540 664 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 AC114755.5-201ENST00000447760 831 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.67□□□□□ -1.82
NPAS1Q99742 RPL38P1-201ENST00000460914 211 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.67□□□□□ -1.82
NPAS1Q99742 PPIAP15-201ENST00000479662 484 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 AL049874.1-201ENST00000489560 388 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 AC110792.1-201ENST00000491826 472 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.67□□□□□ -1.82
NPAS1Q99742 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.67□□□□□ -1.82
NPAS1Q99742 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.67□□□□□ -1.82
NPAS1Q99742 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.67□□□□□ -1.82
NPAS1Q99742 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.67□□□□□ -1.82
NPAS1Q99742 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.67□□□□□ -1.82
NPAS1Q99742 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.67□□□□□ -1.82
NPAS1Q99742 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.67□□□□□ -1.82
NPAS1Q99742 RPL23AP84-201ENST00000571193 464 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 AC025627.2-201ENST00000576220 160 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 MIR4293-201ENST00000584305 78 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.67□□□□□ -1.82
NPAS1Q99742 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.67□□□□□ -1.82
NPAS1Q99742 AL049634.3-201ENST00000604968 457 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 MIR486-1-201ENST00000612171 68 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
NPAS1Q99742 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.67□□□□□ -1.82
NPAS1Q99742 AL359880.1-201ENST00000621879 266 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 MIR7702-201ENST00000621931 59 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 AC068724.3-201ENST00000625906 87 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.67□□□□□ -1.82
NPAS1Q99742 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPAS1Q99742 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPAS1Q99742 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.67□□□□□ -1.82
NPAS1Q99742 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPAS1Q99742 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.67□□□□□ -1.82
NPAS1Q99742 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NPAS1Q99742 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.66□□□□□ -1.82
NPAS1Q99742 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
NPAS1Q99742 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
NPAS1Q99742 OR4G2P-201ENST00000328113 903 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 AC073343.1-201ENST00000328239 651 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 Y_RNA.9-201ENST00000362354 101 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 SNORD115-47-201ENST00000391226 86 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 CALM2P3-201ENST00000400429 449 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 RNA5SP129-201ENST00000410276 118 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 RNU2-39P-201ENST00000410604 198 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.66□□□□□ -1.82
NPAS1Q99742 AL159169.1-201ENST00000421119 127 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 MTCYBP5-201ENST00000423752 1135 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 RAC1P6-201ENST00000423911 575 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.66□□□□□ -1.82
NPAS1Q99742 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.66□□□□□ -1.82
NPAS1Q99742 AL117339.2-201ENST00000430475 180 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 RPS20P5-201ENST00000434808 360 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NPAS1Q99742 HMGB3P12-201ENST00000438745 556 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 AL356535.1-201ENST00000440335 398 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.66□□□□□ -1.82
NPAS1Q99742 AC027673.1-201ENST00000456245 405 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 RNU7-170P-201ENST00000459303 61 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 AC006512.1-201ENST00000468816 291 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 RPS27AP1-201ENST00000475545 471 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.66□□□□□ -1.82
NPAS1Q99742 SNORA31.8-201ENST00000516327 108 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 RN7SKP21-201ENST00000516503 220 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
NPAS1Q99742 AC090572.1-201ENST00000519251 160 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 AC100870.1-201ENST00000522035 505 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.66□□□□□ -1.82
NPAS1Q99742 OR5D17P-201ENST00000531492 978 ntBASIC3.66□□□□□ -1.82
NPAS1Q99742 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.66□□□□□ -1.82
NPAS1Q99742 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.66□□□□□ -1.82
NPAS1Q99742 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NPAS1Q99742 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NPAS1Q99742 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms