Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RPL31P52-201ENST00000407532 367 ntBASIC2.48□□□□□ -2.01
IFT140Q96RY7 AC098592.2-201ENST00000413158 265 ntBASIC2.48□□□□□ -2.01
IFT140Q96RY7 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.48□□□□□ -2.01
IFT140Q96RY7 AL354695.1-201ENST00000427935 228 ntBASIC2.48□□□□□ -2.01
IFT140Q96RY7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.48□□□□□ -2.01
IFT140Q96RY7 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.48□□□□□ -2.01
IFT140Q96RY7 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.48□□□□□ -2.01
IFT140Q96RY7 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.48□□□□□ -2.01
IFT140Q96RY7 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
IFT140Q96RY7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
IFT140Q96RY7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
IFT140Q96RY7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.48□□□□□ -2.01
IFT140Q96RY7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
IFT140Q96RY7 SRIP3-201ENST00000413200 219 ntBASIC2.47□□□□□ -2.01
IFT140Q96RY7 AL365400.1-201ENST00000431854 640 ntBASIC2.47□□□□□ -2.01
IFT140Q96RY7 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
IFT140Q96RY7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.47□□□□□ -2.01
IFT140Q96RY7 AP001180.3-201ENST00000582221 145 ntBASIC2.47□□□□□ -2.01
IFT140Q96RY7 MIR151B-201ENST00000584249 96 ntBASIC2.47□□□□□ -2.01
IFT140Q96RY7 MIR3660-201ENST00000584845 100 ntBASIC2.47□□□□□ -2.01
IFT140Q96RY7 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
IFT140Q96RY7 AC104307.1-201ENST00000616142 196 ntBASIC2.47□□□□□ -2.01
IFT140Q96RY7 AC092159.4-201ENST00000624944 550 ntBASIC2.47□□□□□ -2.01
IFT140Q96RY7 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
IFT140Q96RY7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
IFT140Q96RY7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
IFT140Q96RY7 RNU6-225P-201ENST00000384613 103 ntBASIC2.46□□□□□ -2.02
IFT140Q96RY7 FO393413.1-201ENST00000402892 195 ntBASIC2.46□□□□□ -2.02
IFT140Q96RY7 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.46□□□□□ -2.02
IFT140Q96RY7 RPL30P3-201ENST00000424262 333 ntBASIC2.46□□□□□ -2.02
IFT140Q96RY7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC2.46□□□□□ -2.02
IFT140Q96RY7 RNU6-1223P-201ENST00000517124 104 ntBASIC2.46□□□□□ -2.02
IFT140Q96RY7 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.46□□□□□ -2.02
IFT140Q96RY7 AC104115.2-201ENST00000523026 687 ntBASIC2.46□□□□□ -2.02
IFT140Q96RY7 AC121758.2-201ENST00000553271 193 ntBASIC2.46□□□□□ -2.02
IFT140Q96RY7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.46□□□□□ -2.02
IFT140Q96RY7 MIR5194-201ENST00000582634 120 ntBASIC2.46□□□□□ -2.02
IFT140Q96RY7 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.46□□□□□ -2.02
IFT140Q96RY7 DUXAP4-201ENST00000603046 613 ntBASIC2.46□□□□□ -2.02
IFT140Q96RY7 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.46□□□□□ -2.02
IFT140Q96RY7 AC091895.1-201ENST00000624494 256 ntBASIC2.46□□□□□ -2.02
IFT140Q96RY7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.46□□□□□ -2.02
IFT140Q96RY7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
IFT140Q96RY7 PABPC1P9-201ENST00000426076 1612 ntBASIC2.46□□□□□ -2.02
IFT140Q96RY7 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
IFT140Q96RY7 HMGB3P2-201ENST00000411913 584 ntBASIC2.45□□□□□ -2.02
IFT140Q96RY7 MTND4LP16-201ENST00000440828 295 ntBASIC2.45□□□□□ -2.02
IFT140Q96RY7 KATNBL1P3-201ENST00000443475 909 ntBASIC2.45□□□□□ -2.02
IFT140Q96RY7 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.45□□□□□ -2.02
IFT140Q96RY7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
IFT140Q96RY7 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
IFT140Q96RY7 AC010627.1-201ENST00000503819 1294 ntBASIC2.45□□□□□ -2.02
IFT140Q96RY7 SNORD59.2-201ENST00000516873 68 ntBASIC2.45□□□□□ -2.02
IFT140Q96RY7 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.45□□□□□ -2.02
IFT140Q96RY7 NOP56P3-201ENST00000549457 385 ntBASIC2.45□□□□□ -2.02
IFT140Q96RY7 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.45□□□□□ -2.02
IFT140Q96RY7 MAPK10-266ENST00000641066 6555 ntBASIC2.45□□□□□ -2.02
IFT140Q96RY7 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
IFT140Q96RY7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
IFT140Q96RY7 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.45□□□□□ -2.02
IFT140Q96RY7 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.45□□□□□ -2.02
IFT140Q96RY7 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
IFT140Q96RY7 HMGB1P45-201ENST00000435986 653 ntBASIC2.45□□□□□ -2.02
IFT140Q96RY7 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.45□□□□□ -2.02
IFT140Q96RY7 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
IFT140Q96RY7 AL359273.1-201ENST00000510918 627 ntBASIC2.45□□□□□ -2.02
IFT140Q96RY7 AC010625.1-201ENST00000511296 403 ntBASIC2.45□□□□□ -2.02
IFT140Q96RY7 RN7SKP49-201ENST00000516675 260 ntBASIC2.45□□□□□ -2.02
IFT140Q96RY7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.45□□□□□ -2.02
IFT140Q96RY7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.45□□□□□ -2.02
IFT140Q96RY7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.45□□□□□ -2.02
IFT140Q96RY7 HSPE1P14-201ENST00000605812 302 ntBASIC2.45□□□□□ -2.02
IFT140Q96RY7 AC140725.3-201ENST00000616193 880 ntBASIC2.45□□□□□ -2.02
IFT140Q96RY7 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
IFT140Q96RY7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.44□□□□□ -2.02
IFT140Q96RY7 ANAPC10P1-201ENST00000395991 556 ntBASIC2.44□□□□□ -2.02
IFT140Q96RY7 MTCYBP45-201ENST00000435243 565 ntBASIC2.44□□□□□ -2.02
IFT140Q96RY7 AL513321.1-201ENST00000441175 761 ntBASIC2.44□□□□□ -2.02
IFT140Q96RY7 UBBP3-201ENST00000445497 241 ntBASIC2.44□□□□□ -2.02
IFT140Q96RY7 AC007395.1-201ENST00000451333 677 ntBASIC2.44□□□□□ -2.02
IFT140Q96RY7 RPL21P134-201ENST00000453468 483 ntBASIC2.44□□□□□ -2.02
IFT140Q96RY7 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.44□□□□□ -2.02
IFT140Q96RY7 AC104472.2-201ENST00000469035 601 ntBASIC2.44□□□□□ -2.02
IFT140Q96RY7 AF131216.2-201ENST00000512316 564 ntBASIC2.44□□□□□ -2.02
IFT140Q96RY7 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.44□□□□□ -2.02
IFT140Q96RY7 AL731537.2-201ENST00000561565 951 ntBASIC2.44□□□□□ -2.02
IFT140Q96RY7 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.44□□□□□ -2.02
IFT140Q96RY7 AC012493.3-201ENST00000604494 112 ntBASIC2.44□□□□□ -2.02
IFT140Q96RY7 RNA5SP489-201ENST00000410986 109 ntBASIC2.43□□□□□ -2.02
IFT140Q96RY7 CALM1P1-201ENST00000442082 433 ntBASIC2.43□□□□□ -2.02
IFT140Q96RY7 SSXP4-201ENST00000451349 245 ntBASIC2.43□□□□□ -2.02
IFT140Q96RY7 MIR3935-201ENST00000583472 104 ntBASIC2.43□□□□□ -2.02
IFT140Q96RY7 AL136520.1-201ENST00000600311 1322 ntBASIC2.43□□□□□ -2.02
IFT140Q96RY7 MIR598-201ENST00000384868 97 ntBASIC2.42□□□□□ -2.02
IFT140Q96RY7 HMGN2P21-201ENST00000447764 270 ntBASIC2.42□□□□□ -2.02
IFT140Q96RY7 AP002345.1-201ENST00000456493 928 ntBASIC2.42□□□□□ -2.02
IFT140Q96RY7 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.42□□□□□ -2.02
IFT140Q96RY7 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.42□□□□□ -2.02
IFT140Q96RY7 AC002487.1-201ENST00000604565 994 ntBASIC2.42□□□□□ -2.02
IFT140Q96RY7 AP002907.1-201ENST00000606361 1430 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms